Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13o19
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 351 2e-96
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 351 2e-96
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 351 2e-96
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 351 2e-96
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 351 2e-96
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 350 4e-96
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 348 1e-95
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 348 1e-95
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 112 1e-24
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 112 1e-24
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 112 1e-24
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 112 1e-24
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 112 1e-24
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 109 1e-23
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 102 1e-21
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 84 4e-16
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 84 4e-16
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 84 4e-16
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 84 4e-16
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 84 6e-16
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 78 4e-14
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 78 4e-14
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 78 4e-14
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 78 4e-14
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 78 4e-14
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 78 4e-14
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 78 4e-14
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 74 5e-13
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 74 5e-13
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 74 5e-13
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 74 5e-13
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 74 5e-13
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 60 6e-09
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 57 6e-08
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 57 6e-08
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 57 6e-08
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 57 6e-08
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 38 0.029
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 38 0.029
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 38 0.029
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 38 0.029
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 38 0.029
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 38 0.029
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 38 0.029
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 37 0.089
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 37 0.089
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 37 0.089
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 37 0.089
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 37 0.089
AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis ... 37 0.089
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 37 0.089
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 37 0.089
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 36 0.21
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 36 0.21
BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 34 0.47
BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 34 0.47
BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein. 34 0.47
BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 34 0.47
AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens ... 34 0.47
AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens ... 34 0.47
AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens ... 34 0.47
AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein. 34 0.47
AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein. 34 0.47
EF212155-1|ABN05231.1| 391|Homo sapiens cellular titin isoform ... 33 0.83
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 33 0.83
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 33 0.83
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 33 0.83
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 33 0.83
BC101292-1|AAI01293.1| 243|Homo sapiens LOC643699 protein protein. 33 1.4
U71264-1|AAB94738.1| 483|Homo sapiens islet cell autoantigen p6... 31 4.4
U37183-1|AAC50935.1| 471|Homo sapiens islet cell autoantigen p6... 31 4.4
U26591-1|AAB19033.1| 483|Homo sapiens diabetes mellitus type I ... 31 4.4
L21181-1|AAA64927.1| 483|Homo sapiens autoantigen p69 protein. 31 4.4
L01100-1|AAA02564.1| 483|Homo sapiens 69 kD autoantigen protein. 31 4.4
BC008640-1|AAH08640.1| 482|Homo sapiens islet cell autoantigen ... 31 4.4
AL391812-1|CAI17380.1| 1616|Homo sapiens myosin IIIA protein. 31 4.4
AL360217-1|CAD13206.2| 1616|Homo sapiens myosin IIIA protein. 31 4.4
AL358612-1|CAH73814.1| 1616|Homo sapiens myosin IIIA protein. 31 4.4
AL162503-4|CAH73661.1| 1616|Homo sapiens myosin IIIA protein. 31 4.4
BC014389-1|AAH14389.1| 528|Homo sapiens glutaminyl-tRNA synthas... 31 5.8
BC006084-1|AAH06084.1| 528|Homo sapiens glutaminyl-tRNA synthas... 31 5.8
AL390074-4|CAH72094.1| 319|Homo sapiens glutaminyl-tRNA synthas... 31 5.8
AL390074-3|CAH72093.1| 528|Homo sapiens glutaminyl-tRNA synthas... 31 5.8
AK023509-1|BAB14592.1| 528|Homo sapiens protein ( Homo sapiens ... 31 5.8
AK022251-1|BAB13996.1| 303|Homo sapiens protein ( Homo sapiens ... 31 5.8
AK001851-1|BAA91941.1| 528|Homo sapiens protein ( Homo sapiens ... 31 5.8
BC106949-1|AAI06950.1| 600|Homo sapiens RSHL3 protein protein. 30 7.7
AL132795-2|CAI20497.1| 716|Homo sapiens protein ( ial spokehead... 30 7.7
AK093104-1|BAC04058.1| 371|Homo sapiens protein ( Homo sapiens ... 30 7.7
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 351 bits (863), Expect = 2e-96
Identities = 166/184 (90%), Positives = 175/184 (95%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK+K KGPDAA KLP VTPHT+CRLKLLKLERIKDYLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 351 bits (863), Expect = 2e-96
Identities = 166/184 (90%), Positives = 175/184 (95%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK+K KGPDAA KLP VTPHT+CRLKLLKLERIKDYLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 351 bits (863), Expect = 2e-96
Identities = 166/184 (90%), Positives = 175/184 (95%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK+K KGPDAA KLP VTPHT+CRLKLLKLERIKDYLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 351 bits (863), Expect = 2e-96
Identities = 166/184 (90%), Positives = 175/184 (95%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK+K KGPDAA KLP VTPHT+CRLKLLKLERIKDYLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 351 bits (863), Expect = 2e-96
Identities = 166/184 (90%), Positives = 175/184 (95%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK+K KGPDAA KLP VTPHT+CRLKLLKLERIKDYLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 350 bits (860), Expect = 4e-96
Identities = 165/184 (89%), Positives = 175/184 (95%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK++ KGPDAA KLP VTPHT+CRLKLLKLERIKDYLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKRTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 348 bits (856), Expect = 1e-95
Identities = 165/184 (89%), Positives = 174/184 (94%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK+K KGPDAA KLP VTPHT+CRLKLLKLERIK YLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKGYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 348 bits (855), Expect = 1e-95
Identities = 165/184 (89%), Positives = 174/184 (94%)
Frame = +2
Query: 170 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 349
YEPP+PTRVGKKK+K KGPDAA KLP VTPHT+CRLKLLKLERIKDYLLMEEEFIRNQE+
Sbjct: 25 YEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQ 84
Query: 350 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 529
+KP EEK EEERSKVDDLRGTPMSVG LEEIIDDN AIVSTSVGSEHYVSILSFVDKD L
Sbjct: 85 MKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNRAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 530 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 709
EPGCSVLLNHKVHAV+GVL DDTDP+V+VMK+EKAPQETYADIGGLD QIQEIKESVELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 710 LTHP 721
LTHP
Sbjct: 205 LTHP 208
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 112 bits (269), Expect = 1e-24
Identities = 55/145 (37%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 463
KL++ ++L ++EE+I+++++ LK + +EE ++ + P+ +G E +D N AI
Sbjct: 46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAI 102
Query: 464 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQE 643
V ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D + ++ ++ P
Sbjct: 103 VGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDV 162
Query: 644 TYADIGGLDTQIQEIKESVELPLTH 718
YADIGG+D Q QE++E+VELPLTH
Sbjct: 163 MYADIGGMDIQKQEVREAVELPLTH 187
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 112 bits (269), Expect = 1e-24
Identities = 55/145 (37%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 463
KL++ ++L ++EE+I+++++ LK + +EE ++ + P+ +G E +D N AI
Sbjct: 46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAI 102
Query: 464 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQE 643
V ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D + ++ ++ P
Sbjct: 103 VGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDV 162
Query: 644 TYADIGGLDTQIQEIKESVELPLTH 718
YADIGG+D Q QE++E+VELPLTH
Sbjct: 163 MYADIGGMDIQKQEVREAVELPLTH 187
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 112 bits (269), Expect = 1e-24
Identities = 55/145 (37%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 463
KL++ ++L ++EE+I+++++ LK + +EE ++ + P+ +G E +D N AI
Sbjct: 46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAI 102
Query: 464 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQE 643
V ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D + ++ ++ P
Sbjct: 103 VGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDV 162
Query: 644 TYADIGGLDTQIQEIKESVELPLTH 718
YADIGG+D Q QE++E+VELPLTH
Sbjct: 163 MYADIGGMDIQKQEVREAVELPLTH 187
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 112 bits (269), Expect = 1e-24
Identities = 55/145 (37%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 463
KL++ ++L ++EE+I+++++ LK + +EE ++ + P+ +G E +D N AI
Sbjct: 46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAI 102
Query: 464 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQE 643
V ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D + ++ ++ P
Sbjct: 103 VGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDV 162
Query: 644 TYADIGGLDTQIQEIKESVELPLTH 718
YADIGG+D Q QE++E+VELPLTH
Sbjct: 163 MYADIGGMDIQKQEVREAVELPLTH 187
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 112 bits (269), Expect = 1e-24
Identities = 55/145 (37%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 463
KL++ ++L ++EE+I+++++ LK + +EE ++ + P+ +G E +D N AI
Sbjct: 46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAI 102
Query: 464 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQE 643
V ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D + ++ ++ P
Sbjct: 103 VGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDV 162
Query: 644 TYADIGGLDTQIQEIKESVELPLTH 718
YADIGG+D Q QE++E+VELPLTH
Sbjct: 163 MYADIGGMDIQKQEVREAVELPLTH 187
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 109 bits (262), Expect = 1e-23
Identities = 54/145 (37%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 463
KL++ ++L ++EE+I+++++ LK + +EE ++ + P+ +G E +D N AI
Sbjct: 46 KLQQELEFLEVQEEYIKDEQKNLKKEFFHAQEEVKRIQSI---PLVIGQFLEAVDQNTAI 102
Query: 464 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQE 643
V ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D + ++ + P
Sbjct: 103 VGSTTGSSYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSGQKPDV 162
Query: 644 TYADIGGLDTQIQEIKESVELPLTH 718
YADIGG+D Q QE++E+VELP+TH
Sbjct: 163 MYADIGGMDIQKQEVREAVELPVTH 187
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 102 bits (245), Expect = 1e-21
Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Frame = +2
Query: 350 LKPQEEKIEEERSK----VDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVD 517
L P+ E +E+ S+ V ++ P+ +G E +D N AIV ++ GS +YV ILS +D
Sbjct: 30 LGPEPEDLEDLYSRYKEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID 89
Query: 518 KDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKES 697
++ L+P SV L+ +A+V VL + D + ++ ++ P YADIGG+D Q QE++E+
Sbjct: 90 RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA 149
Query: 698 VELPLTH 718
VELPLTH
Sbjct: 150 VELPLTH 156
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 84.2 bits (199), Expect = 4e-16
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +2
Query: 275 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEI 442
L+ L +I++ L+ + +N RL+ Q ++ + R ++ L+ VG +
Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79
Query: 443 IDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 622
+D +V + V + +D + + P C V L + + + +L + DP+VS+M
Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMM 139
Query: 623 LEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+EK P TY IGGLD QI+EIKE +ELP+ HP
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 172
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 84.2 bits (199), Expect = 4e-16
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +2
Query: 275 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEI 442
L+ L +I++ L+ + +N RL+ Q ++ + R ++ L+ VG +
Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79
Query: 443 IDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 622
+D +V + V + +D + + P C V L + + + +L + DP+VS+M
Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMM 139
Query: 623 LEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+EK P TY IGGLD QI+EIKE +ELP+ HP
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 172
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 84.2 bits (199), Expect = 4e-16
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +2
Query: 275 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEI 442
L+ L +I++ L+ + +N RL+ Q ++ + R ++ L+ VG +
Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 79
Query: 443 IDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 622
+D +V + V + +D + + P C V L + + + +L + DP+VS+M
Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMM 139
Query: 623 LEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+EK P TY IGGLD QI+EIKE +ELP+ HP
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 172
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 84.2 bits (199), Expect = 4e-16
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +2
Query: 275 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEI 442
L+ L +I++ L+ + +N RL+ Q ++ + R ++ L+ VG +
Sbjct: 16 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA 75
Query: 443 IDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 622
+D +V + V + +D + + P C V L + + + +L + DP+VS+M
Sbjct: 76 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMM 135
Query: 623 LEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+EK P TY IGGLD QI+EIKE +ELP+ HP
Sbjct: 136 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 168
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 83.8 bits (198), Expect = 6e-16
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +2
Query: 275 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEI 442
L+ L +I++ L+ + +N RL+ Q ++ + R ++ L+ VG +
Sbjct: 20 LRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLRRELQLLQEQGSYVGEVVRA 79
Query: 443 IDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 622
+D +V + V + +D + + P C V L + + + +L + DP+VS+M
Sbjct: 80 MDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMM 139
Query: 623 LEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+EK P TY IGGLD QI+EIKE +ELP+ HP
Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 172
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 77.8 bits (183), Expect = 4e-14
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Frame = +2
Query: 314 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--------------- 448
+M+ E +R L+ ++KI+E K+ + P V N+ E++D
Sbjct: 19 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDL 78
Query: 449 DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 613
D+ A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 79 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 138
Query: 614 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTH 718
M++++ P E Y+DIGGLD QIQE+ E++ LP+ H
Sbjct: 139 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 173
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 77.8 bits (183), Expect = 4e-14
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Frame = +2
Query: 314 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--------------- 448
+M+ E +R L+ ++KI+E K+ + P V N+ E++D
Sbjct: 19 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDL 78
Query: 449 DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 613
D+ A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 79 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 138
Query: 614 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTH 718
M++++ P E Y+DIGGLD QIQE+ E++ LP+ H
Sbjct: 139 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 173
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 77.8 bits (183), Expect = 4e-14
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Frame = +2
Query: 314 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--------------- 448
+M+ E +R L+ ++KI+E K+ + P V N+ E++D
Sbjct: 106 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDL 165
Query: 449 DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 613
D+ A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 166 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 225
Query: 614 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTH 718
M++++ P E Y+DIGGLD QIQE+ E++ LP+ H
Sbjct: 226 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 260
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 77.8 bits (183), Expect = 4e-14
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Frame = +2
Query: 314 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--------------- 448
+M+ E +R L+ ++KI+E K+ + P V N+ E++D
Sbjct: 54 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDL 113
Query: 449 DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 613
D+ A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 114 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 173
Query: 614 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTH 718
M++++ P E Y+DIGGLD QIQE+ E++ LP+ H
Sbjct: 174 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 208
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 77.8 bits (183), Expect = 4e-14
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Frame = +2
Query: 314 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--------------- 448
+M+ E +R L+ ++KI+E K+ + P V N+ E++D
Sbjct: 54 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDL 113
Query: 449 DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 613
D+ A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 114 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 173
Query: 614 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTH 718
M++++ P E Y+DIGGLD QIQE+ E++ LP+ H
Sbjct: 174 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 208
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 77.8 bits (183), Expect = 4e-14
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Frame = +2
Query: 314 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--------------- 448
+M+ E +R L+ ++KI+E K+ + P V N+ E++D
Sbjct: 54 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDL 113
Query: 449 DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 613
D+ A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 114 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 173
Query: 614 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTH 718
M++++ P E Y+DIGGLD QIQE+ E++ LP+ H
Sbjct: 174 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 208
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 77.8 bits (183), Expect = 4e-14
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 20/155 (12%)
Frame = +2
Query: 314 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--------------- 448
+M+ E +R L+ ++KI+E K+ + P V N+ E++D
Sbjct: 39 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDL 98
Query: 449 DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVS 613
D+ A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 99 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 158
Query: 614 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTH 718
M++++ P E Y+DIGGLD QIQE+ E++ LP+ H
Sbjct: 159 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNH 193
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 74.1 bits (174), Expect = 5e-13
Identities = 41/134 (30%), Positives = 72/134 (53%)
Frame = +2
Query: 341 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 520
+E+LK ++ E+ + + L+ VG + + + + IV + G + V +DK
Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89
Query: 521 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESV 700
+L+PG V L+ ++ L + DP+V M E +Y++IGGL QI+E++E +
Sbjct: 90 SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149
Query: 701 ELPLTHPGIL*RNG 742
ELPLT+P + R G
Sbjct: 150 ELPLTNPELFQRVG 163
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 74.1 bits (174), Expect = 5e-13
Identities = 41/134 (30%), Positives = 72/134 (53%)
Frame = +2
Query: 341 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 520
+E+LK ++ E+ + + L+ VG + + + + IV + G + V +DK
Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89
Query: 521 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESV 700
+L+PG V L+ ++ L + DP+V M E +Y++IGGL QI+E++E +
Sbjct: 90 SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149
Query: 701 ELPLTHPGIL*RNG 742
ELPLT+P + R G
Sbjct: 150 ELPLTNPELFQRVG 163
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 74.1 bits (174), Expect = 5e-13
Identities = 41/134 (30%), Positives = 72/134 (53%)
Frame = +2
Query: 341 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 520
+E+LK ++ E+ + + L+ VG + + + + IV + G + V +DK
Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89
Query: 521 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESV 700
+L+PG V L+ ++ L + DP+V M E +Y++IGGL QI+E++E +
Sbjct: 90 SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149
Query: 701 ELPLTHPGIL*RNG 742
ELPLT+P + R G
Sbjct: 150 ELPLTNPELFQRVG 163
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 74.1 bits (174), Expect = 5e-13
Identities = 41/134 (30%), Positives = 72/134 (53%)
Frame = +2
Query: 341 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 520
+E+LK ++ E+ + + L+ VG + + + + IV + G + V +DK
Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89
Query: 521 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESV 700
+L+PG V L+ ++ L + DP+V M E +Y++IGGL QI+E++E +
Sbjct: 90 SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149
Query: 701 ELPLTHPGIL*RNG 742
ELPLT+P + R G
Sbjct: 150 ELPLTNPELFQRVG 163
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 74.1 bits (174), Expect = 5e-13
Identities = 41/134 (30%), Positives = 72/134 (53%)
Frame = +2
Query: 341 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 520
+E+LK ++ E+ + + L+ VG + + + + IV + G + V +DK
Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89
Query: 521 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESV 700
+L+PG V L+ ++ L + DP+V M E +Y++IGGL QI+E++E +
Sbjct: 90 SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVI 149
Query: 701 ELPLTHPGIL*RNG 742
ELPLT+P + R G
Sbjct: 150 ELPLTNPELFQRVG 163
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 60.5 bits (140), Expect = 6e-09
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +2
Query: 599 DPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
DP+VS+M +EK P TY IGGLD QI+EIKE +ELP+ HP
Sbjct: 6 DPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 46
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 57.2 bits (132), Expect = 6e-08
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 413 PMSVGNLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 580
P+ V +II +D I++ ++ V + V +E G V ++ + +
Sbjct: 92 PLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHI 151
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
L DP V++M++E+ P TY+D+GG QI++++E VE PL HP
Sbjct: 152 PLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 198
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 57.2 bits (132), Expect = 6e-08
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 413 PMSVGNLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 580
P+ V +II +D I++ ++ V + V +E G V ++ + +
Sbjct: 92 PLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHI 151
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
L DP V++M++E+ P TY+D+GG QI++++E VE PL HP
Sbjct: 152 PLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 198
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 57.2 bits (132), Expect = 6e-08
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 413 PMSVGNLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 580
P+ V +II +D I++ ++ V + V +E G V ++ + +
Sbjct: 68 PLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHI 127
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
L DP V++M++E+ P TY+D+GG QI++++E VE PL HP
Sbjct: 128 PLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 174
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 57.2 bits (132), Expect = 6e-08
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 413 PMSVGNLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 580
P+ V +II +D I++ ++ V + V +E G V ++ + +
Sbjct: 92 PLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHI 151
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHP 721
L DP V++M++E+ P TY+D+GG QI++++E VE PL HP
Sbjct: 152 PLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 198
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 38.3 bits (85), Expect = 0.029
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPGI 727
V+ + +P+ + E + Y DIGG Q+ +IKE VELPL HP +
Sbjct: 181 VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 229
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 500
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 38.3 bits (85), Expect = 0.029
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPGI 727
V+ + +P+ + E + Y DIGG Q+ +IKE VELPL HP +
Sbjct: 181 VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 229
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 500
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 38.3 bits (85), Expect = 0.029
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPGI 727
V+ + +P+ + E + Y DIGG Q+ +IKE VELPL HP +
Sbjct: 19 VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 67
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 308 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 338
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 38.3 bits (85), Expect = 0.029
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPGI 727
V+ + +P+ + E + Y DIGG Q+ +IKE VELPL HP +
Sbjct: 181 VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 229
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 500
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 38.3 bits (85), Expect = 0.029
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPGI 727
V+ + +P+ + E + Y DIGG Q+ +IKE VELPL HP +
Sbjct: 119 VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 167
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 38.3 bits (85), Expect = 0.029
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPGI 727
V+ + +P+ + E + Y DIGG Q+ +IKE VELPL HP +
Sbjct: 181 VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 229
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 500
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 38.3 bits (85), Expect = 0.029
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 581 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPGI 727
V+ + +P+ + E + Y DIGG Q+ +IKE VELPL HP +
Sbjct: 181 VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 229
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 500
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 731
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 731
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 731
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 731
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly
factor-2 protein.
Length = 980
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 731
>AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis
factor 6 variant protein.
Length = 836
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 715 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 748
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 610 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 643
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 36.7 bits (81), Expect = 0.089
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHPGIL 730
K P ++ D+GGL +EI E+++LPL HP +L
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL 731
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 139 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 169
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.21
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 629 KAPQETYADIGGLDTQIQEIKESVELPLTHP 721
+ PQ T+ DIGGL+ +E++E V+ P+ HP
Sbjct: 98 EVPQVTWEDIGGLEDVKRELQELVQYPVEHP 128
>BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 224 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 258
>BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 224 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 258
>BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein.
Length = 391
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 223 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 257
>BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 224 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 258
>AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12833 fis, clone NT2RP2003157, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 224 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 258
>AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10657 fis, clone NT2RP2006043, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 224 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 258
>AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10614 fis, clone NT2RP2005436, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 224 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 258
>AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein.
Length = 402
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 224 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 258
>AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 287 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 394
KLE +K ++ E++ RNQERLK +EE+ EER K+
Sbjct: 215 KLEELKR-VVAEKQEKRNQERLKRREEREREEREKL 249
>EF212155-1|ABN05231.1| 391|Homo sapiens cellular titin isoform
PEVK variant 3 protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.83
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +2
Query: 173 EPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERL 352
EPP P +V + K+K + + P + K+E + L EEE + +
Sbjct: 250 EPPPPPKVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTE 309
Query: 353 KPQEEKIEEERSKVDDLRGTPMSVGNLEEI 442
+P+EE I EE ++ P S+ +EE+
Sbjct: 310 EPEEEPISEE-----EIPEEPPSIEEVEEV 334
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 644 TYADIGGLDTQIQEIKESVELPLTHP 721
TY IGGL +Q++ I+E +ELPL P
Sbjct: 350 TYDMIGGLSSQLKAIREIIELPLKQP 375
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 635 PQETYADIGGLDTQIQEIKESVELPLTHPGIL*RNGNQ 748
P +++DIGGL++ +++++VE PL HP R G Q
Sbjct: 621 PNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQ 658
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 644 TYADIGGLDTQIQEIKESVELPLTHP 721
TY IGGL +Q++ I+E +ELPL P
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQP 376
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 635 PQETYADIGGLDTQIQEIKESVELPLTHPGIL*RNGNQ 748
P +++DIGGL++ +++++VE PL HP R G Q
Sbjct: 622 PNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQ 659
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 644 TYADIGGLDTQIQEIKESVELPLTHP 721
TY IGGL +Q++ I+E +ELPL P
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQP 376
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 635 PQETYADIGGLDTQIQEIKESVELPLTHPGIL*RNGNQ 748
P +++DIGGL++ +++++VE PL HP R G Q
Sbjct: 622 PNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQ 659
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 644 TYADIGGLDTQIQEIKESVELPLTHP 721
TY IGGL +Q++ I+E +ELPL P
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQP 376
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 635 PQETYADIGGLDTQIQEIKESVELPLTHPGIL*RNGNQ 748
P +++DIGGL++ +++++VE PL HP R G Q
Sbjct: 622 PNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQ 659
>BC101292-1|AAI01293.1| 243|Homo sapiens LOC643699 protein protein.
Length = 243
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 320 EEEFIRNQE-RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN 454
+EE IR QE RL+ QEE+++E+ K+ L P SV EE+ ++N
Sbjct: 128 QEERIREQEERLRKQEERLQEQHEKLRQL-AKPQSV--FEELNNEN 170
>U71264-1|AAB94738.1| 483|Homo sapiens islet cell autoantigen p69
protein.
Length = 483
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 EFIRNQERLKPQEEKIE-EERSKVDDLRGTPMSVGNLEEII---DDNHAIVSTSVGSEHY 493
EF + P ++ +E EE+ K++ T +V ++I ++N S+S +E
Sbjct: 263 EFTTLKSLQDPMKKLVEKEEKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDG 322
Query: 494 VSILSFVDKDQLEPGCS 544
SILS +DK CS
Sbjct: 323 KSILSALDKGSTHTACS 339
>U37183-1|AAC50935.1| 471|Homo sapiens islet cell autoantigen p69
protein.
Length = 471
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 EFIRNQERLKPQEEKIE-EERSKVDDLRGTPMSVGNLEEII---DDNHAIVSTSVGSEHY 493
EF + P ++ +E EE+ K++ T +V ++I ++N S+S +E
Sbjct: 251 EFTTLKSLQDPMKKLVEKEEKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDG 310
Query: 494 VSILSFVDKDQLEPGCS 544
SILS +DK CS
Sbjct: 311 KSILSALDKGSTHTACS 327
>U26591-1|AAB19033.1| 483|Homo sapiens diabetes mellitus type I
autoantigen protein.
Length = 483
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 EFIRNQERLKPQEEKIE-EERSKVDDLRGTPMSVGNLEEII---DDNHAIVSTSVGSEHY 493
EF + P ++ +E EE+ K++ T +V ++I ++N S+S +E
Sbjct: 263 EFTTLKSLQDPMKKLVEKEEKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDG 322
Query: 494 VSILSFVDKDQLEPGCS 544
SILS +DK CS
Sbjct: 323 KSILSALDKGSTHTACS 339
>L21181-1|AAA64927.1| 483|Homo sapiens autoantigen p69 protein.
Length = 483
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 EFIRNQERLKPQEEKIE-EERSKVDDLRGTPMSVGNLEEII---DDNHAIVSTSVGSEHY 493
EF + P ++ +E EE+ K++ T +V ++I ++N S+S +E
Sbjct: 263 EFTTLKSLQDPMKKLVEKEEKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDG 322
Query: 494 VSILSFVDKDQLEPGCS 544
SILS +DK CS
Sbjct: 323 KSILSALDKGSTHTACS 339
>L01100-1|AAA02564.1| 483|Homo sapiens 69 kD autoantigen protein.
Length = 483
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 EFIRNQERLKPQEEKIE-EERSKVDDLRGTPMSVGNLEEII---DDNHAIVSTSVGSEHY 493
EF + P ++ +E EE+ K++ T +V ++I ++N S+S +E
Sbjct: 263 EFTTLKSLQDPMKKLVEKEEKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDG 322
Query: 494 VSILSFVDKDQLEPGCS 544
SILS +DK CS
Sbjct: 323 KSILSALDKGSTHTACS 339
>BC008640-1|AAH08640.1| 482|Homo sapiens islet cell autoantigen 1,
69kDa protein.
Length = 482
Score = 31.1 bits (67), Expect = 4.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 EFIRNQERLKPQEEKIE-EERSKVDDLRGTPMSVGNLEEII---DDNHAIVSTSVGSEHY 493
EF + P ++ +E EE+ K++ T +V ++I ++N S+S +E
Sbjct: 262 EFTTLKSLQDPMKKLVEKEEKKKINQQESTDAAVQEPSQLISLEEENQRKESSSFKTEDG 321
Query: 494 VSILSFVDKDQLEPGCS 544
SILS +DK CS
Sbjct: 322 KSILSALDKGSTHTACS 338
>AL391812-1|CAI17380.1| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +3
Query: 105 EWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGKLRDQMRLSSFRKSRLI 263
E VK QVE VT+ + + ++ ++S + KR+ +LR ++SSF+ R++
Sbjct: 1329 ETVKERQVEPVTQAQEEEDKAAVFIQSKYRGYKRRQQLRKD-KMSSFKHQRIV 1380
>AL360217-1|CAD13206.2| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +3
Query: 105 EWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGKLRDQMRLSSFRKSRLI 263
E VK QVE VT+ + + ++ ++S + KR+ +LR ++SSF+ R++
Sbjct: 1329 ETVKERQVEPVTQAQEEEDKAAVFIQSKYRGYKRRQQLRKD-KMSSFKHQRIV 1380
>AL358612-1|CAH73814.1| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +3
Query: 105 EWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGKLRDQMRLSSFRKSRLI 263
E VK QVE VT+ + + ++ ++S + KR+ +LR ++SSF+ R++
Sbjct: 1329 ETVKERQVEPVTQAQEEEDKAAVFIQSKYRGYKRRQQLRKD-KMSSFKHQRIV 1380
>AL162503-4|CAH73661.1| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +3
Query: 105 EWVKINQVEVVTKKMTKTRRRSMSLRSLHELVKRKGKLRDQMRLSSFRKSRLI 263
E VK QVE VT+ + + ++ ++S + KR+ +LR ++SSF+ R++
Sbjct: 1329 ETVKERQVEPVTQAQEEEDKAAVFIQSKYRGYKRRQQLRKD-KMSSFKHQRIV 1380
>BC014389-1|AAH14389.1| 528|Homo sapiens glutaminyl-tRNA synthase
(glutamine-hydrolyzing)-like 1 protein.
Length = 528
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 RKAKGPDAALKLPQVTPHTRCR--LKLLKLER-IKDYLLMEEEFIRNQERLKPQEEKIEE 379
R + AALK Q+TP C+ L L+K + + Y+ + EE Q + EK +
Sbjct: 4 RSLREVSAALKQGQITPTELCQKCLSLIKKTKFLNAYITVSEEVALKQAE---ESEKRYK 60
Query: 380 ERSKVDDLRGTPMSV 424
+ DL G P++V
Sbjct: 61 NGQSLGDLDGIPIAV 75
>BC006084-1|AAH06084.1| 528|Homo sapiens glutaminyl-tRNA synthase
(glutamine-hydrolyzing)-like 1 protein.
Length = 528
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 RKAKGPDAALKLPQVTPHTRCR--LKLLKLER-IKDYLLMEEEFIRNQERLKPQEEKIEE 379
R + AALK Q+TP C+ L L+K + + Y+ + EE Q + EK +
Sbjct: 4 RSLREVSAALKQGQITPTELCQKCLSLIKKTKFLNAYITVSEEVALKQAE---ESEKRYK 60
Query: 380 ERSKVDDLRGTPMSV 424
+ DL G P++V
Sbjct: 61 NGQSLGDLDGIPIAV 75
>AL390074-4|CAH72094.1| 319|Homo sapiens glutaminyl-tRNA synthase
(glutamine-hydrolyzing)-like 1 protein.
Length = 319
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 RKAKGPDAALKLPQVTPHTRCR--LKLLKLER-IKDYLLMEEEFIRNQERLKPQEEKIEE 379
R + AALK Q+TP C+ L L+K + + Y+ + EE Q + EK +
Sbjct: 4 RSLREVSAALKQGQITPTELCQKCLSLIKKTKFLNAYITVSEEVALKQAE---ESEKRYK 60
Query: 380 ERSKVDDLRGTPMSV 424
+ DL G P++V
Sbjct: 61 NGQSLGDLDGIPIAV 75
>AL390074-3|CAH72093.1| 528|Homo sapiens glutaminyl-tRNA synthase
(glutamine-hydrolyzing)-like 1 protein.
Length = 528
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 RKAKGPDAALKLPQVTPHTRCR--LKLLKLER-IKDYLLMEEEFIRNQERLKPQEEKIEE 379
R + AALK Q+TP C+ L L+K + + Y+ + EE Q + EK +
Sbjct: 4 RSLREVSAALKQGQITPTELCQKCLSLIKKTKFLNAYITVSEEVALKQAE---ESEKRYK 60
Query: 380 ERSKVDDLRGTPMSV 424
+ DL G P++V
Sbjct: 61 NGQSLGDLDGIPIAV 75
>AK023509-1|BAB14592.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ13447 fis, clone PLACE1002991, weakly similar to
PUTATIVE AMIDASE (EC 3.5.1.4). ).
Length = 528
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 RKAKGPDAALKLPQVTPHTRCR--LKLLKLER-IKDYLLMEEEFIRNQERLKPQEEKIEE 379
R + AALK Q+TP C+ L L+K + + Y+ + EE Q + EK +
Sbjct: 4 RSLREVSAALKQGQITPTELCQKCLSLIKKTKFLNAYITVSEEVALKQAE---ESEKRYK 60
Query: 380 ERSKVDDLRGTPMSV 424
+ DL G P++V
Sbjct: 61 NGQSLGDLDGIPIAV 75
>AK022251-1|BAB13996.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ12189 fis, clone MAMMA1000841, moderately
similar to PUTATIVE AMIDASE (EC 3.5.1.4). ).
Length = 303
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 RKAKGPDAALKLPQVTPHTRCR--LKLLKLER-IKDYLLMEEEFIRNQERLKPQEEKIEE 379
R + AALK Q+TP C+ L L+K + + Y+ + EE Q + EK +
Sbjct: 4 RSLREVSAALKQGQITPTELCQKCLSLIKKTKFLNAYITVSEEVALKQAE---ESEKRYK 60
Query: 380 ERSKVDDLRGTPMSV 424
+ DL G P++V
Sbjct: 61 NGQSLGDLDGIPIAV 75
>AK001851-1|BAA91941.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ10989 fis, clone PLACE1001989, weakly similar to
PUTATIVE AMIDASE (EC 3.5.1.4). ).
Length = 528
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 RKAKGPDAALKLPQVTPHTRCR--LKLLKLER-IKDYLLMEEEFIRNQERLKPQEEKIEE 379
R + AALK Q+TP C+ L L+K + + Y+ + EE Q + EK +
Sbjct: 4 RSLREVSAALKQGQITPTELCQKCLSLIKKTKFLNAYITVSEEVALKQAE---ESEKRYK 60
Query: 380 ERSKVDDLRGTPMSV 424
+ DL G P++V
Sbjct: 61 NGQSLGDLDGIPIAV 75
>BC106949-1|AAI06950.1| 600|Homo sapiens RSHL3 protein protein.
Length = 600
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 233 ALK-LPQVTPHTRCRL--KLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEER 385
ALK L P RCR K+L LE +Y++ E EF ++ + +EE + EER
Sbjct: 340 ALKQLTDTHPIQRCRFWGKILGLEM--NYIVAEVEFREGEDEEEVEEEDVAEER 391
>AL132795-2|CAI20497.1| 716|Homo sapiens protein ( ial
spokehead-like 1, a novel ).).
Length = 716
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 233 ALK-LPQVTPHTRCRL--KLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEER 385
ALK L P RCR K+L LE +Y++ E EF ++ + +EE + EER
Sbjct: 340 ALKQLTDTHPIQRCRFWGKILGLEM--NYIVAEVEFREGEDEEEVEEEDVAEER 391
>AK093104-1|BAC04058.1| 371|Homo sapiens protein ( Homo sapiens
cDNA FLJ35785 fis, clone TESTI2005603, moderately
similar to Homo sapiens 88-kDa Golgi protein (GM88)
mRNA. ).
Length = 371
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 320 EEEFIRNQE-RLKPQEEKIEEERSKVDDLRGTPMSV 424
+EE IR QE RL+ QEE+I+E+ + L P SV
Sbjct: 258 QEERIREQEERLRKQEERIQEQHKSLQQL-AKPQSV 292
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,603,721
Number of Sequences: 237096
Number of extensions: 2000676
Number of successful extensions: 11268
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 10296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11115
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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