Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13o19
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    27   0.19 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.0  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 458 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 580
           AIV  ++GS  +  I  +V +  LE  C+++  H V  ++G
Sbjct: 335 AIVLGAIGSIVFYIISRYVFRSALEDYCNIVATHLVCGILG 375


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 87  FPSLLNFKINTSAPIYNLLRLQSENYHHT 1
           FP L+ +K   S P YN+   Q+  ++ T
Sbjct: 198 FPPLVGWKDKRSHPAYNMTFAQNGPFNTT 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,158
Number of Sequences: 438
Number of extensions: 3667
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)