Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13o07
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing ...    63   1e-09
AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens ...    63   1e-09
BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein.        30   8.7  
AK027816-1|BAB55389.1|  436|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2 ...    30   8.7  

>BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing 1
           protein.
          Length = 290

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
 Frame = +3

Query: 237 KEMTQFEKERGYDVTFINPKGGYVIKTSVAGDRKAFINICSNDNIGKPSHNIQE----VN 404
           KE+ Q +  R  + T I P+ G+ IKT+ + + K FINIC + +I  P+   +E    + 
Sbjct: 33  KELQQAQTTRP-ESTQIQPQPGFCIKTN-SSEGKVFINICHSPSIPPPADVTEEELLQML 90

Query: 405 GKRGMNWQIPYSLLPPREDYDQNKKRCVIYDVVFHPNTLRMAEVNKQFRELVNNTAFEGL 584
            +    ++IP SL  P  + D   + C  YDV  + +  R  + +   RELV   A EGL
Sbjct: 91  EEDQAGFRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGL 150

Query: 585 QKTYNIHLD 611
           +  YN+ L+
Sbjct: 151 EDKYNLQLN 159


>AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20643 fis, clone KAT02633. ).
          Length = 290

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
 Frame = +3

Query: 237 KEMTQFEKERGYDVTFINPKGGYVIKTSVAGDRKAFINICSNDNIGKPSHNIQE----VN 404
           KE+ Q +  R  + T I P+ G+ IKT+ + + K FINIC + +I  P+   +E    + 
Sbjct: 33  KELQQAQTTRP-ESTQIQPQPGFCIKTN-SSEGKVFINICHSPSIPPPADVTEEELLQML 90

Query: 405 GKRGMNWQIPYSLLPPREDYDQNKKRCVIYDVVFHPNTLRMAEVNKQFRELVNNTAFEGL 584
            +    ++IP SL  P  + D   + C  YDV  + +  R  + +   RELV   A EGL
Sbjct: 91  EEDQAGFRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGL 150

Query: 585 QKTYNIHLD 611
           +  YN+ L+
Sbjct: 151 EDKYNLQLN 159


>BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein.
          Length = 1291

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 126  RSDLEAIQDALKNKKFREL-LTEYCEEVRDPANQALYQKEMTQFEKERGYD 275
            ++DLE +Q AL NK+   L +T+  E  +   ++A  +KE  + + E  Y+
Sbjct: 1170 KADLEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYE 1220


>AK027816-1|BAB55389.1|  436|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14910 fis, clone PLACE1006368, weakly similar to
           HYALURONAN-MEDIATED MOTILITY RECEPTOR. ).
          Length = 436

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 126 RSDLEAIQDALKNKKFREL-LTEYCEEVRDPANQALYQKEMTQFEKERGYD 275
           ++DLE +Q AL NK+   L +T+  E  +   ++A  +KE  + + E  Y+
Sbjct: 315 KADLEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYE 365


>AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2
            protein.
          Length = 1388

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 126  RSDLEAIQDALKNKKFREL-LTEYCEEVRDPANQALYQKEMTQFEKERGYD 275
            ++DLE +Q AL NK+   L +T+  E  +   ++A  +KE  + + E  Y+
Sbjct: 1267 KADLEEVQSALYNKEMECLRMTDEVERTQTLESKAFQEKEQLRSKLEEMYE 1317


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,826,792
Number of Sequences: 237096
Number of extensions: 2241277
Number of successful extensions: 8408
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8406
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)