Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13o07
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    29   3.0  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    29   3.0  
U40957-1|ABC71816.2|   87|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z67735-2|CAA91530.2|  403|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z77653-2|CAB01125.3|  383|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z92834-11|CAB07388.2|  594|Caenorhabditis elegans Hypothetical p...    27   9.2  
Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF016448-10|ABR92607.1|  849|Caenorhabditis elegans Smek (dictyo...    27   9.2  
AF016448-8|AAW30665.1|  536|Caenorhabditis elegans Smek (dictyos...    27   9.2  
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos...    27   9.2  
AC006680-5|AAK72301.2|  300|Caenorhabditis elegans Serpentine re...    27   9.2  

>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
           protein ZC53.4 protein.
          Length = 1410

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +3

Query: 444 LPPREDYDQNKKRCVIYDVVFHPNTLRMAEVNK-QFRELVNNT---AFEGLQKTYNIHLD 611
           +P     D NKK  +I+D +      +++E+ K +F E   +T    +  L    +  LD
Sbjct: 372 IPDPSSLDPNKKTLIIFDDLLFEKQNKISEIKKDEFLEFTRDTFKEKYNFLTIDKSRDLD 431

Query: 612 VNNFRLPKSSYK 647
              FR  K++YK
Sbjct: 432 DGKFRKYKTAYK 443


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/72 (25%), Positives = 35/72 (48%)
 Frame = +3

Query: 153 ALKNKKFRELLTEYCEEVRDPANQALYQKEMTQFEKERGYDVTFINPKGGYVIKTSVAGD 332
           A+K+ K    + EY  EV +  +   Y+K  T++  ++ +   ++   G Y I  +V G+
Sbjct: 686 AVKDIKKGRFIIEYIGEVVERDD---YEKRKTKYAADKKHKHHYLCDTGVYTIDATVYGN 742

Query: 333 RKAFINICSNDN 368
              F+N   + N
Sbjct: 743 PSRFVNHSCDPN 754


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/72 (25%), Positives = 35/72 (48%)
 Frame = +3

Query: 153 ALKNKKFRELLTEYCEEVRDPANQALYQKEMTQFEKERGYDVTFINPKGGYVIKTSVAGD 332
           A+K+ K    + EY  EV +  +   Y+K  T++  ++ +   ++   G Y I  +V G+
Sbjct: 700 AVKDIKKGRFIIEYIGEVVERDD---YEKRKTKYAADKKHKHHYLCDTGVYTIDATVYGN 756

Query: 333 RKAFINICSNDN 368
              F+N   + N
Sbjct: 757 PSRFVNHSCDPN 768


>U40957-1|ABC71816.2|   87|Caenorhabditis elegans Hypothetical
           protein R02E4.3 protein.
          Length = 87

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +3

Query: 87  TGVKPRDEDTQFSRSDLEAIQDALKNKKFRELLTEYCEEVRDPANQALYQKEMTQ---FE 257
           TGV  +D  T    ++LE  QDA K  + + L TE   E ++  NQ   QK +       
Sbjct: 5   TGVSSKDVSTLKELAELEKHQDAAKANE-QNLKTE--AETKEEQNQEEVQKSLVVDAIHS 61

Query: 258 KERGYDVTFINPKGGYVIK 314
            +  +D  F+ P    V+K
Sbjct: 62  AKAKWDQCFLKPDNCCVVK 80


>Z67735-2|CAA91530.2|  403|Caenorhabditis elegans Hypothetical
           protein C15A7.1 protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 358 LQILIKAFLSPATLVLIT*PPFGFMNVTSYPRSFSNCVISF 236
           + I  K F+   T +L+    F F++   YP  F NC  SF
Sbjct: 145 MDIHSKGFVMTTTKILLK--TFCFLDFKGYPHDFQNCSFSF 183


>Z77653-2|CAB01125.3|  383|Caenorhabditis elegans Hypothetical
           protein C13C12.2 protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/81 (20%), Positives = 35/81 (43%)
 Frame = +3

Query: 207 RDPANQALYQKEMTQFEKERGYDVTFINPKGGYVIKTSVAGDRKAFINICSNDNIGKPSH 386
           R   N+   ++E  Q   ERG  V +I   G Y +       ++ F  +     +   + 
Sbjct: 33  RGVKNEITVKEEDVQIVNERGNRVYYIRAPGNYSLDFKKIKVKQNFGFLAGEIGV---TL 89

Query: 387 NIQEVNGKRGMNWQIPYSLLP 449
            +  + G  G+ + +PY+++P
Sbjct: 90  QVPVLEGPAGIRFDLPYTMVP 110


>U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical
           protein C48B6.4 protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 357 SNDNIGKPSHNIQEVNGK-RGMNWQIPYSLLPPREDYDQNKKRC 485
           S+D  G P +++  +  K        P  L+P +EDY+++KK C
Sbjct: 181 SDDENGWPKYDMNALLEKYENHKDSEPNLLIPTKEDYERDKKTC 224


>Z92834-11|CAB07388.2|  594|Caenorhabditis elegans Hypothetical
           protein F39B2.8 protein.
          Length = 594

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 672 VSPLVQPYPCKMILEAENY 616
           +S L QPYPC  ++EAE++
Sbjct: 54  LSSLDQPYPCGHVVEAEHF 72


>Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical
           protein C44H4.2 protein.
          Length = 738

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 510 PNTLRMAEVNKQFRELVNNTAFEGLQKTYNIHLDVNN-FRLPKSSYKGM 653
           PN LR+   N    E+     F  L K Y+I+L  N  F +  S+++ +
Sbjct: 99  PNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNV 147


>Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = -2

Query: 407 SVNFLNVVRRFADVIITTNINKSFSVAGHTCFDNITSLWIYECYIVSTFLLELCHFFLVK 228
           +V    ++R     I TTN N    V    CFDN+ SL I+      TF  +     +VK
Sbjct: 198 AVGMPTMIRLKEQGIGTTN-NIPDVVPAACCFDNVVSLLIFSVTSSVTFTHDAFFLTMVK 256

Query: 227 SL 222
           S+
Sbjct: 257 SI 258


>Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = -2

Query: 407 SVNFLNVVRRFADVIITTNINKSFSVAGHTCFDNITSLWIYECYIVSTFLLELCHFFLVK 228
           +V    ++R     I TTN N    V    CFDN+ SL I+      TF  +     +VK
Sbjct: 198 AVGMPTMIRLKEQGIGTTN-NIPDVVPAACCFDNVVSLLIFSVTSSVTFTHDAFFLTMVK 256

Query: 227 SL 222
           S+
Sbjct: 257 SI 258


>AF016448-10|ABR92607.1|  849|Caenorhabditis elegans Smek
           (dictyostelium suppressorof mek null) homolog protein 1,
           isoform b protein.
          Length = 849

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 159 KNKKFRELLTEYCEEVRDPANQALYQKEMTQ 251
           K  KFRE+L   C+E+RD  ++ LY+ +  Q
Sbjct: 181 KKAKFREVLNISCDELRDKIHR-LYRAQYIQ 210


>AF016448-8|AAW30665.1|  536|Caenorhabditis elegans Smek
           (dictyostelium suppressorof mek null) homolog protein 1,
           isoform c protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 159 KNKKFRELLTEYCEEVRDPANQALYQKEMTQ 251
           K  KFRE+L   C+E+RD  ++ LY+ +  Q
Sbjct: 417 KKAKFREVLNISCDELRDKIHR-LYRAQYIQ 446


>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
           (dictyostelium suppressorof mek null) homolog protein 1,
           isoform a protein.
          Length = 1085

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 159 KNKKFRELLTEYCEEVRDPANQALYQKEMTQ 251
           K  KFRE+L   C+E+RD  ++ LY+ +  Q
Sbjct: 417 KKAKFREVLNISCDELRDKIHR-LYRAQYIQ 446


>AC006680-5|AAK72301.2|  300|Caenorhabditis elegans Serpentine
           receptor, class x protein60 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -2

Query: 401 NFLNVVRRFADVIITTNINKSFSVAGHTCFDNITSLWIYECYIVSTFLLELCH 243
           +FL  + RF  V +     K FS    +    I  LWI+E  +   F   LCH
Sbjct: 94  HFLISINRFCAVWVPLKYEKWFSRKNTSSI--IILLWIFEVALAIVFYQILCH 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,528,327
Number of Sequences: 27780
Number of extensions: 368746
Number of successful extensions: 961
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)