Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13o07
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          27   0.12 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    26   0.38 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.50 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   1.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 159 KNKKFRELLTEYCEEVRDPANQALYQKEMTQF 254
           KN      L  Y   +RDPA   LYQK ++ F
Sbjct: 400 KNNLIPSALQSYSTSMRDPAFYMLYQKILSYF 431


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +3

Query: 465 DQNKKRCVIYDVVFHPNTLRMAEVNKQFRELVNNTAFEGLQKTYNIHLDVNNFR 626
           D N  R +   V      +R+  VN    E + N  F GL     +HL+ N  R
Sbjct: 802 DGNVLRELQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIR 855


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 159 KNKKFRELLTEYCEEVRDPANQALYQKEMTQF 254
           KN      L  Y   +RDPA   LYQ  ++ F
Sbjct: 400 KNNLIPSALQSYSTSMRDPAFYMLYQNILSYF 431


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = -1

Query: 282 MLHRIHVPSRIVSFLSGKELGSPGHVLLHSTR*EALE----ISYFSMR 151
           M  R+H+ +  +SFL+G+    P H      R EAL+    ++YF +R
Sbjct: 404 MAGRVHISNATLSFLNGEFEVEPAH---GEDREEALQKAGIVTYFIVR 448


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 20/77 (25%), Positives = 31/77 (40%)
 Frame = +3

Query: 99  PRDEDTQFSRSDLEAIQDALKNKKFRELLTEYCEEVRDPANQALYQKEMTQFEKERGYDV 278
           PRD         L   Q + K  + REL+     +    AN  +   E+TQ  ++RG  V
Sbjct: 65  PRDFPRSHRFKSLPRCQLSNKRDRSRELI-----KAAILANDFMKNLELTQIRRDRGLHV 119

Query: 279 TFINPKGGYVIKTSVAG 329
           +     G  +I+    G
Sbjct: 120 SCSFSAGSTIIREGDVG 136


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 222 QALYQKEMTQFEKERGYDVTFIN 290
           +A+YQ  +  ++KER +  TF N
Sbjct: 865 EAIYQLMLDCWQKERTHRPTFAN 887


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 47  IYIPSKLQRNHNGNGS 94
           I++P K +  H G+GS
Sbjct: 131 IWVPQKYRLRHKGDGS 146


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 47  IYIPSKLQRNHNGNGS 94
           I++P K +  H G+GS
Sbjct: 131 IWVPQKYRLRHKGDGS 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,172
Number of Sequences: 438
Number of extensions: 4918
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)