Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13m08
(254 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical pr... 30 0.26
U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical pr... 28 1.1
U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical pr... 28 1.1
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 1.8
U13072-3|AAK31396.4| 326|Caenorhabditis elegans Serpentine rece... 26 3.2
U23453-9|AAC46755.1| 727|Caenorhabditis elegans Hypothetical pr... 26 4.3
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 26 4.3
AF022972-11|AAN84825.1| 370|Caenorhabditis elegans Udp-glucuron... 26 4.3
AF022972-10|AAC48233.2| 523|Caenorhabditis elegans Udp-glucuron... 26 4.3
Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical pr... 25 9.8
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 25 9.8
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 25 9.8
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 25 9.8
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 25 9.8
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 25 9.8
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 25 9.8
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 25 9.8
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 25 9.8
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 25 9.8
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 25 9.8
>Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical
protein C03E10.3 protein.
Length = 386
Score = 29.9 bits (64), Expect = 0.26
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 249 FLNILLFIHSEVLHIIIYTFIIYSFHKHTQQLIF 148
FLNIL +++ +I +Y F + SF +T + F
Sbjct: 350 FLNILYLSSNQITYIYLYLFFVTSFKLNTSSISF 383
>U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical
protein R02E12.2b protein.
Length = 377
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 225 HSEVLHIIIYTFIIYSFHKHTQQLIFNIPS--FST 127
H + II+Y+ + Y+F + Q +F+I S FST
Sbjct: 166 HDHLAKIILYSDVFYTFFLYVQSEVFDISSDAFST 200
>U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical
protein R02E12.2a protein.
Length = 636
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 225 HSEVLHIIIYTFIIYSFHKHTQQLIFNIPS--FST 127
H + II+Y+ + Y+F + Q +F+I S FST
Sbjct: 425 HDHLAKIILYSDVFYTFFLYVQSEVFDISSDAFST 459
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 63 IINVANQKSNCFATWVQQFISQLKRKEY*KLIVGYVYEN 179
++ V NQK + AT ++ + Q R+E L+ + YEN
Sbjct: 102 MLEVKNQKDDAVATLIESLLYQDARREK-NLMTHFTYEN 139
>U13072-3|AAK31396.4| 326|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 3 protein.
Length = 326
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -1
Query: 83 LICYINNKCCLKYFLSN--TMSGYY 15
L C++ +CC YFLS+ S YY
Sbjct: 109 LPCFVFERCCASYFLSDYEKRSRYY 133
>U23453-9|AAC46755.1| 727|Caenorhabditis elegans Hypothetical
protein B0252.1 protein.
Length = 727
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 160 LGMFMKTINNKSIYNDMEYFR 222
LG KT++N+ I+NDM Y +
Sbjct: 307 LGFLDKTVDNQVIHNDMFYLQ 327
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 240 ILLFIHSEVLHIIIYTFIIYS 178
I+LFIHS ++ + ++ +II S
Sbjct: 82 IILFIHSSIISLRVFVYIISS 102
>AF022972-11|AAN84825.1| 370|Caenorhabditis elegans
Udp-glucuronosyltransferase protein39, isoform b
protein.
Length = 370
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 28 IVFDKKYFKQHLLLM*QIKNQIVSPR 105
I+FD Y K L L Q++NQ + P+
Sbjct: 276 ILFDSSYAKNALKLAEQLENQPIKPK 301
>AF022972-10|AAC48233.2| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein39, isoform a
protein.
Length = 523
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 28 IVFDKKYFKQHLLLM*QIKNQIVSPR 105
I+FD Y K L L Q++NQ + P+
Sbjct: 429 ILFDSSYAKNALKLAEQLENQPIKPK 454
>Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical
protein F08H9.12 protein.
Length = 320
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 249 FLNILLFIHSEVLHIIIYTFIIYSFHKHTQQLIF 148
FLNI+L + + +++I + + H+H+QQ I+
Sbjct: 188 FLNIVLPLLTPLIYIPVMIVTRKNSHQHSQQHIY 221
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2730 EKEQILKNNCFIC 2742
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2709 EKEQILKNNCFIC 2721
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2765 EKEQILKNNCFIC 2777
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2719 EKEQILKNNCFIC 2731
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2719 EKEQILKNNCFIC 2731
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2730 EKEQILKNNCFIC 2742
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2719 EKEQILKNNCFIC 2731
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2709 EKEQILKNNCFIC 2721
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 131 EKEGILKINCWVC 169
EKE ILK NC++C
Sbjct: 2765 EKEQILKNNCFIC 2777
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 246 LNILLFIHSEVLHIIIYTFIIYSFHKHTQQ---LIFNIPS 136
L L +H+ LH +I TF++ HK +Q LIF PS
Sbjct: 292 LTNLSVLHAS-LHGLISTFVVLIIHKPYRQFIILIFKSPS 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,241,308
Number of Sequences: 27780
Number of extensions: 92180
Number of successful extensions: 204
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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