Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13m08
(254 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 0.78
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 0.78
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 1.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 1.8
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 3.1
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 3.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 20 4.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 20 4.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 20 4.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 20 4.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 20 4.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 4.1
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 20 4.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 5.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 5.5
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 20 5.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 19 7.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 19 7.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 19 9.6
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 19 9.6
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 19 9.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 9.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 9.6
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 0.78
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 66 INVANQKSNCFATWVQQFISQLKR 137
+++ +K NC +W+ +F ++ KR
Sbjct: 391 LHMQPRKKNCCRSWLSKFPTRSKR 414
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 0.78
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 66 INVANQKSNCFATWVQQFISQLKR 137
+++ +K NC +W+ +F ++ KR
Sbjct: 391 LHMQPRKKNCCRSWLSKFPTRSKR 414
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 1.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 131 EKEGILKINCWV 166
EK IL NCWV
Sbjct: 47 EKNQILTTNCWV 58
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 1.8
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +1
Query: 172 MKTINNKSIYNDMEYFRMNKQ 234
+ +++NK+I+N+ Y NK+
Sbjct: 315 ISSLSNKTIHNNNNYKNYNKK 335
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 20.6 bits (41), Expect = 3.1
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 38 IRNILNNIYY*CSKSKIKLFRHVGSTIYQSVEKEGILKINCW 163
+ N + NI+ + K+ R++ S +K LKI W
Sbjct: 55 VHNHIQNIFKIIKSTNEKITRYIIRMFLISQQKTSKLKIYKW 96
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 20.6 bits (41), Expect = 3.1
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 38 IRNILNNIYY*CSKSKIKLFRHVGSTIYQSVEKEGILKINCW 163
+ N + NI+ + K+ R++ S +K LKI W
Sbjct: 38 VHNHIQNIFKIIKSTNEKITRYIIRMFLISQQKTSKLKIYKW 79
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 175 KTI-NNKSIYNDMEYFRMN 228
KTI NN + Y ++Y+ +N
Sbjct: 88 KTIHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 175 KTI-NNKSIYNDMEYFRMN 228
KTI NN + Y ++Y+ +N
Sbjct: 88 KTIHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 175 KTI-NNKSIYNDMEYFRMN 228
KTI NN + Y ++Y+ +N
Sbjct: 88 KTIHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 175 KTI-NNKSIYNDMEYFRMN 228
KTI NN + Y ++Y+ +N
Sbjct: 88 KTIHNNNNNYKKLQYYNIN 106
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 175 KTINNKSIYNDMEYFRMN 228
KTI+N + YN+ Y N
Sbjct: 88 KTIHNNNNYNNNNYNNYN 105
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 175 KTI-NNKSIYNDMEYFRMN 228
KTI NN + Y ++Y+ +N
Sbjct: 321 KTIHNNNNNYKKLQYYNIN 339
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 249 FLNILLFIHSEVLHIIIYTFII 184
F + LLFI + + +Y FI+
Sbjct: 84 FASFLLFILLVQIAVAVYAFIV 105
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 5.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 175 KTINNKSIYNDMEYFRMNK 231
KTI+N + YN+ Y K
Sbjct: 88 KTIHNNNNYNNNNYNNYKK 106
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 5.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 52 KQHLLLM*QIKNQIVSPR 105
K L QIKN IVSP+
Sbjct: 205 KDKATLADQIKNGIVSPQ 222
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 19.8 bits (39), Expect = 5.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 52 KQHLLLM*QIKNQIVSPR 105
K L QIKN IVSP+
Sbjct: 200 KDKATLADQIKNGIVSPQ 217
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.4 bits (38), Expect = 7.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 175 KTINNKSIYNDMEY 216
KTI+N + YN+ Y
Sbjct: 321 KTIHNNNNYNNNNY 334
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.4 bits (38), Expect = 7.2
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1
Query: 172 MKTINNKSIYNDMEYFRMNKQ 234
+ +++NK+I+N+ Y N +
Sbjct: 304 ISSLSNKTIHNNNNYNNYNNK 324
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 19.0 bits (37), Expect = 9.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 71 CSKSKIKLFRHVGSTIY 121
C K K+ RH+ S Y
Sbjct: 451 CRKRGEKIARHINSVSY 467
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 19.0 bits (37), Expect = 9.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 11 MYNNLTLCLI 40
+YNNLT+ +I
Sbjct: 2 LYNNLTIVII 11
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 19.0 bits (37), Expect = 9.6
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +2
Query: 17 NNLTLCLIRNILN 55
NN+ L L++NI++
Sbjct: 78 NNINLILLQNIID 90
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.0 bits (37), Expect = 9.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 71 INNKCCLKYF 42
INNK LK+F
Sbjct: 878 INNKYALKFF 887
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.0 bits (37), Expect = 9.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 89 KLFRHVGSTIYQSVEKEGI 145
K F ST+Y+ +EGI
Sbjct: 489 KAFGIPSSTLYKIARREGI 507
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,872
Number of Sequences: 438
Number of extensions: 1280
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4511484
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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