Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13m07
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid tran... 136 2e-32
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 118 4e-27
AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid tr... 111 4e-25
AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid tr... 88 6e-18
AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid tr... 88 6e-18
Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical pr... 84 7e-17
U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid tran... 84 9e-17
AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical ... 80 1e-15
AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical ... 80 1e-15
U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid tran... 76 2e-14
AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid tr... 62 2e-10
AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid tr... 41 9e-04
X53314-1|CAA37396.1| 294|Caenorhabditis elegans deg-1 product p... 31 0.70
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 31 0.70
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 31 0.70
Z92825-4|CAB07312.1| 467|Caenorhabditis elegans Hypothetical pr... 31 0.92
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 30 1.2
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 29 2.8
Z79596-7|CAO78700.1| 73|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z79596-6|CAJ43438.1| 225|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z79596-5|CAB01858.3| 369|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid
transporter protein 2 protein.
Length = 483
Score = 136 bits (328), Expect = 2e-32
Identities = 67/121 (55%), Positives = 88/121 (72%), Gaps = 2/121 (1%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMM--SWIMPL 436
RNLPRAI IS+P+VT+VY L N+AYF+VL+ DEIL S AVA+TF++KIL +MPL
Sbjct: 240 RNLPRAIYISIPIVTIVYMLVNIAYFSVLTVDEILDSDAVAITFADKILGTFGSKILMPL 299
Query: 435 FVALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMVSSLIISFI 256
FV+ GSLNG + T SR+FF GARN LP ++I I++LTP+PSLIF+ + I+
Sbjct: 300 FVSFSCVGSLNGILITCSRMFFSGARNSQLPELFAMISIRQLTPIPSLIFLGGTSIVMLF 359
Query: 255 I 253
I
Sbjct: 360 I 360
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 118 bits (284), Expect = 4e-27
Identities = 57/120 (47%), Positives = 84/120 (70%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
RNLP AI IS+ T++Y LTNVA + +S DE+L S AVAV F+ K+ ++IMPL V
Sbjct: 255 RNLPLAIAISITSCTVIYVLTNVALYTAISPDEMLESPAVAVLFANKLYGKFAFIMPLCV 314
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMVSSLIISFIIA 250
A T GS NG I+TS+RLF+ GAR G +P +++I+ K TP+P++I + +L I++++A
Sbjct: 315 ACSTIGSANGVIFTSARLFYSGAREGQMPAVLTMINKKTKTPIPAVI-LTGALSIAYLLA 373
>AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid
transporter protein 3 protein.
Length = 493
Score = 111 bits (267), Expect = 4e-25
Identities = 54/122 (44%), Positives = 82/122 (67%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
RNLP +I IS + T++YTLTNVA + ++ DE+L+S AVAV F+EK ++ MP+FV
Sbjct: 255 RNLPLSIAISCSLCTIIYTLTNVALYTSITPDEMLASPAVAVLFAEKNYGWFAFCMPIFV 314
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMVSSLIISFIIA 250
A T GS NG I TSSRLF+ GAR G +P +++++ TP+P++I + L + +++
Sbjct: 315 ACSTIGSANGVILTSSRLFYCGAREGQMPNVLTMVNKTTKTPIPAVI-LTGLLSLLYLLL 373
Query: 249 LN 244
N
Sbjct: 374 SN 375
>AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid
transporter protein5, isoform b protein.
Length = 521
Score = 87.8 bits (208), Expect = 6e-18
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
RN+P A+ + VVT +Y NVAYF VL + + S AVA FS + L + ++P +
Sbjct: 233 RNVPFALLTGISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFANVVPFLI 292
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTP-VPSLIFMVSSLIISFII 253
+ GSLN +++ SR + AR GHLP S ++ + +P V L V +L+IS+I
Sbjct: 293 GILLIGSLNSNLFSGSRYMYAAARQGHLPACFSCVNTETESPRVAVLAQSVLALVISYI- 351
Query: 252 ALNGSMNTRLIFFYFLF 202
G ++T + + F F
Sbjct: 352 ---GDLDTLITYVMFGF 365
>AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid
transporter protein5, isoform a protein.
Length = 537
Score = 87.8 bits (208), Expect = 6e-18
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
RN+P A+ + VVT +Y NVAYF VL + + S AVA FS + L + ++P +
Sbjct: 233 RNVPFALLTGISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFANVVPFLI 292
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTP-VPSLIFMVSSLIISFII 253
+ GSLN +++ SR + AR GHLP S ++ + +P V L V +L+IS+I
Sbjct: 293 GILLIGSLNSNLFSGSRYMYAAARQGHLPACFSCVNTETESPRVAVLAQSVLALVISYI- 351
Query: 252 ALNGSMNTRLIFFYFLF 202
G ++T + + F F
Sbjct: 352 ---GDLDTLITYVMFGF 365
>Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical
protein T11F9.4 protein.
Length = 523
Score = 84.2 bits (199), Expect = 7e-17
Identities = 43/119 (36%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
R +P +I I M + ++Y NVAY VLS E+++S+AVA+ F+ K L ++++P+ V
Sbjct: 244 RTMPLSIIIGMTCIGVIYVAVNVAYSIVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMV 303
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTP-VPSLIFMVSSLIISFI 256
A+ GSLN ++++SR +R GH+P AIS I +P V L+ ++ ++ +SF+
Sbjct: 304 AILLIGSLNSTMFSASRYLQAVSRQGHIPSAISGIAPNCDSPRVALLVHILIAIAVSFL 362
>U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid
transporter protein 4 protein.
Length = 526
Score = 83.8 bits (198), Expect = 9e-17
Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
R +P A+ + +VT VY N++Y VL+ +I++S+AVA F++ L S+ +P +
Sbjct: 246 RTMPIALLGGVSIVTAVYLAMNISYMTVLTPGQIMNSTAVAADFAQITLGGFSYAIPFMI 305
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIF-MVSSLIISFI 256
AL G+LN I+ SR AR GHLP +S I+ + +P +L+F +V +++++FI
Sbjct: 306 ALLLIGTLNSNIFCGSRFTHAAAREGHLPTFLSCINEESNSPRAALLFQLVCTVVVTFI 364
>AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical
protein Y53H1C.1b protein.
Length = 527
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
R +P A+ + VTLVY NV+Y VL ++ + +SSAVA F+ L S+ +P +
Sbjct: 249 RTMPIALLGGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMI 308
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIF-MVSSLIISFI 256
++ G+LN I+ SR AR GHLP +S I+ + +P +L+F ++ ++ ++F+
Sbjct: 309 SILLIGTLNSNIFCGSRFTHAAAREGHLPTFLSCINAESNSPRAALLFQLICTIAVTFV 367
>AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical
protein Y53H1C.1a protein.
Length = 541
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFV 430
R +P A+ + VTLVY NV+Y VL ++ + +SSAVA F+ L S+ +P +
Sbjct: 249 RTMPIALLGGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMI 308
Query: 429 ALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIF-MVSSLIISFI 256
++ G+LN I+ SR AR GHLP +S I+ + +P +L+F ++ ++ ++F+
Sbjct: 309 SILLIGTLNSNIFCGSRFTHAAAREGHLPTFLSCINAESNSPRAALLFQLICTIAVTFV 367
>U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid
transporter protein 8 protein.
Length = 483
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKIL-KMMSWIMPLF 433
+ LPRA + + ++Y L NV+YFA+L+ EI+ SSAVA TF ++ + ++ +P
Sbjct: 239 KTLPRACLGGLLISAVIYVLVNVSYFAILTPQEIIDSSAVATTFIQRTVGNGPAFAVPAV 298
Query: 432 VALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIF-MVSSLIISFI 256
V G+LNG ++ SR G+R +P SLI + +P S+ F ++S+I +F+
Sbjct: 299 VGFLLVGTLNGDVFGWSRYMVAGSRRKMMPTCFSLIHVDNDSPRVSVFFHTLTSIIFAFM 358
>AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid
transporter protein 7 protein.
Length = 506
Score = 62.5 bits (145), Expect = 2e-10
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAV------TFSEKILKMMSW 448
R LP A + + V+ L NV+YF+VLS ++ +S AVAV TF+E+ L +
Sbjct: 240 RTLPIAAISGIAISATVFILMNVSYFSVLSVEDFKNSPAVAVVRTFFITFAERTLGDFHY 299
Query: 447 IMPLFVALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMVSSLI 268
+P ++L GS+N I+ SR + GA+ +P + I + +P + + + ++
Sbjct: 300 AIPFLISLLLIGSMNTTIFACSRYMYSGAQQSVMPTPLRGIHHRTRSP---RLAVFAEIL 356
Query: 267 ISFIIALNGSMNTRLIFFYF 208
I+ ++ G+++ + + F
Sbjct: 357 IAICLSFIGNLDQLISYMSF 376
>AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid
transporter protein5, isoform c protein.
Length = 278
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -3
Query: 609 RNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVA 487
RN+P A+ + VVT +Y NVAYF VL + + S AVA
Sbjct: 233 RNVPFALLTGISVVTAIYVAINVAYFVVLDVETVKQSDAVA 273
>X53314-1|CAA37396.1| 294|Caenorhabditis elegans deg-1 product
protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 463 QNDVLDNAALRGSVYIWIPQR-RHIHFLATFLRRCQERTF-TFGDFTHRHQEVDPGAFTH 290
QN ++D+ + G +P+ RH R C E+ + GDF H Q++D
Sbjct: 95 QNGLIDDCSC-GDPRFPVPEGYRHCSAFNATARTCLEKNIGSVGDFHHITQKMDKCVCKQ 153
Query: 289 IYGKFIDNLLYYCTKW 242
+ I + + C+KW
Sbjct: 154 SCEEIIHEVTFSCSKW 169
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 463 QNDVLDNAALRGSVYIWIPQR-RHIHFLATFLRRCQERTF-TFGDFTHRHQEVDPGAFTH 290
QN ++D+ + G +P+ RH R C E+ + GDF H Q++D
Sbjct: 579 QNGLIDDCSC-GDPRFPVPEGYRHCSAFNATARTCLEKNIGSVGDFHHITQKMDKCVCKQ 637
Query: 289 IYGKFIDNLLYYCTKW 242
+ I + + C+KW
Sbjct: 638 SCEEIIHEVTFSCSKW 653
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 463 QNDVLDNAALRGSVYIWIPQR-RHIHFLATFLRRCQERTF-TFGDFTHRHQEVDPGAFTH 290
QN ++D+ + G +P+ RH R C E+ + GDF H Q++D
Sbjct: 579 QNGLIDDCSC-GDPRFPVPEGYRHCSAFNATARTCLEKNIGSVGDFHHITQKMDKCVCKQ 637
Query: 289 IYGKFIDNLLYYCTKW 242
+ I + + C+KW
Sbjct: 638 SCEEIIHEVTFSCSKW 653
>Z92825-4|CAB07312.1| 467|Caenorhabditis elegans Hypothetical
protein C13C4.6 protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 471 KILKMMSWIMPLFVALCTFGSLNGAIYTSSRLFFVGARNGHLPLAIS 331
K LK +++ +FV F NG IYTS+ + + G P+AI+
Sbjct: 242 KCLKDRQFLIQIFVYSINFAIANGLIYTSNAINYRGYNLKGYPIAIA 288
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/83 (22%), Positives = 42/83 (50%)
Frame = -3
Query: 465 LKMMSWIMPLFVALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIF 286
L+++ + +PLF+ L F+ AR+ HL ++ +L+P+ ++
Sbjct: 452 LELLIFYVPLFIGLVNLKKCTFLSEFDKFYLFISARH-HLK------ELLKLSPLKNMCS 504
Query: 285 MVSSLIISFIIALNGSMNTRLIF 217
+S +I+SF++ L + T ++F
Sbjct: 505 SLSIIIVSFVVELPFLLITSMVF 527
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = -3
Query: 450 WIMPLFVALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTP-VPSLIFMVSS 274
W++ + L TFG+ + ++ RL A++ +PL L K++T + ++ +
Sbjct: 414 WVLLIGSFLSTFGAALQCLCSAPRLLQAIAKDEVIPL---LSPFKKVTANNEPFLGLILT 470
Query: 273 LIISFIIALNGSMNT--RLIFFYFL 205
II+ I L GSM+T ++ F+FL
Sbjct: 471 TIIAEIAILMGSMDTIAAVVDFFFL 495
>Z79596-7|CAO78700.1| 73|Caenorhabditis elegans Hypothetical
protein C02C6.3c protein.
Length = 73
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 387 SSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMVSSLIISFIIA 250
+S +VGAR +PL D T + S F S+II+FI++
Sbjct: 24 ASPKMYVGARIAEVPLNKLTCDEPLFTSMSSFKFNFYSMIIAFIVS 69
>Z79596-6|CAJ43438.1| 225|Caenorhabditis elegans Hypothetical
protein C02C6.3b protein.
Length = 225
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 387 SSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMVSSLIISFIIA 250
+S +VGAR +PL D T + S F S+II+FI++
Sbjct: 176 ASPKMYVGARIAEVPLNKLTCDEPLFTSMSSFKFNFYSMIIAFIVS 221
>Z79596-5|CAB01858.3| 369|Caenorhabditis elegans Hypothetical
protein C02C6.3a protein.
Length = 369
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 387 SSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMVSSLIISFIIA 250
+S +VGAR +PL D T + S F S+II+FI++
Sbjct: 320 ASPKMYVGARIAEVPLNKLTCDEPLFTSMSSFKFNFYSMIIAFIVS 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,936,497
Number of Sequences: 27780
Number of extensions: 288644
Number of successful extensions: 930
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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