Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13m06
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   4.4  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = +3

Query: 408 YNID--ILFFCYDLKLNTYY 461
           YN++  +++F  D+ LNTYY
Sbjct: 214 YNLENKLIYFIEDIGLNTYY 233


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 471 HLKCSRCSTLSHNKRKV 421
           +LKC +CST   N  +V
Sbjct: 147 NLKCDKCSTYQSNGEEV 163


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
 Frame = +3

Query: 408 YNID--ILFFCYDLKLNTYY 461
           YN++  + +F  D+ LNTYY
Sbjct: 214 YNLENKLNYFIEDIGLNTYY 233


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 7   FSTTQYLCSGEWLTGKLQEHQKNVP 81
           F+T   +C GE +  +L E+ +N P
Sbjct: 323 FTTVHRICIGETMPMELIENLRNHP 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,392
Number of Sequences: 438
Number of extensions: 2256
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)