Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13m04
         (234 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens ...    28   6.1  
L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kina...    27   8.1  

>AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16772 fis, clone BRAWH3043827, highly  similar
           to Homo sapiens activated p21cdc42Hs kinase (ACK1). ).
          Length = 1086

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -1

Query: 183 TSIIRDSFQAIHFIRITSKPHIPLVQRRTPSISKRASIMIA*KII-MTPPQSPTR 22
           T   R S   +  I    +P +P ++   PS+++ A  M A  ++  TPPQSPTR
Sbjct: 636 TKASRGSGAEVTLIDFGEEPVVPALRPCAPSLAQLA--MDACSLLDETPPQSPTR 688


>L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kinase
           protein.
          Length = 1036

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -1

Query: 183 TSIIRDSFQAIHFIRITSKPHIPLVQRRTPSISKRASIMIA*KII-MTPPQSPTR 22
           T   R S   +  I    +P +P ++   PS+++ A  M A  ++  TPPQSPTR
Sbjct: 558 TKASRGSGAEVTLIDFGEEPVVPALRPCPPSLAQLA--MDACSLLDETPPQSPTR 610


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,831,660
Number of Sequences: 237096
Number of extensions: 620635
Number of successful extensions: 802
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 76,859,062
effective HSP length: 56
effective length of database: 63,581,686
effective search space used: 1335215406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)