Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13m03
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ529300-1|ABF71986.1| 376|Homo sapiens TTG2 protein. 124 4e-28
BC093029-1|AAH93029.1| 292|Homo sapiens TRABD protein protein. 124 4e-28
AL449244-1|CAC15001.1| 376|Homo sapiens hypothetical protein pr... 124 4e-28
AL022328-5|CAI42754.1| 376|Homo sapiens protein ( Human DNA seq... 124 4e-28
BC012445-1|AAH12445.1| 330|Homo sapiens TRABD protein protein. 117 5e-26
AL022328-7|CAB63044.1| 304|Homo sapiens protein ( Human DNA seq... 117 5e-26
AL022328-6|CAB63043.1| 309|Homo sapiens protein ( Human DNA seq... 100 6e-21
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 31 3.0
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 31 3.0
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 31 3.0
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 31 3.0
AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein. 31 3.0
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 31 3.0
AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid anti... 31 3.0
>DQ529300-1|ABF71986.1| 376|Homo sapiens TTG2 protein.
Length = 376
Score = 124 bits (298), Expect = 4e-28
Identities = 59/146 (40%), Positives = 91/146 (62%)
Frame = +3
Query: 255 HLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXX 434
+LP++ T L + + V ++GT HFS S DV + ++ + P+ ++VELC+ RVS
Sbjct: 59 NLPRTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMD 118
Query: 435 XXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEM 614
A+ +KL+QAV+ L++G++ +LLK A I ++LG+APGGEFR A+ E
Sbjct: 119 ESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEA 178
Query: 615 QKIPGCKLYLGDRPIQITIARAFQSL 692
K+P CK +LGDRPI +T RA +L
Sbjct: 179 SKVPFCKFHLGDRPIPVTFKRAIAAL 204
>BC093029-1|AAH93029.1| 292|Homo sapiens TRABD protein protein.
Length = 292
Score = 124 bits (298), Expect = 4e-28
Identities = 59/146 (40%), Positives = 91/146 (62%)
Frame = +3
Query: 255 HLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXX 434
+LP++ T L + + V ++GT HFS S DV + ++ + P+ ++VELC+ RVS
Sbjct: 59 NLPRTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMD 118
Query: 435 XXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEM 614
A+ +KL+QAV+ L++G++ +LLK A I ++LG+APGGEFR A+ E
Sbjct: 119 ESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEA 178
Query: 615 QKIPGCKLYLGDRPIQITIARAFQSL 692
K+P CK +LGDRPI +T RA +L
Sbjct: 179 SKVPFCKFHLGDRPIPVTFKRAIAAL 204
>AL449244-1|CAC15001.1| 376|Homo sapiens hypothetical protein
protein.
Length = 376
Score = 124 bits (298), Expect = 4e-28
Identities = 59/146 (40%), Positives = 91/146 (62%)
Frame = +3
Query: 255 HLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXX 434
+LP++ T L + + V ++GT HFS S DV + ++ + P+ ++VELC+ RVS
Sbjct: 59 NLPRTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMD 118
Query: 435 XXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEM 614
A+ +KL+QAV+ L++G++ +LLK A I ++LG+APGGEFR A+ E
Sbjct: 119 ESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEA 178
Query: 615 QKIPGCKLYLGDRPIQITIARAFQSL 692
K+P CK +LGDRPI +T RA +L
Sbjct: 179 SKVPFCKFHLGDRPIPVTFKRAIAAL 204
>AL022328-5|CAI42754.1| 376|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 376
Score = 124 bits (298), Expect = 4e-28
Identities = 59/146 (40%), Positives = 91/146 (62%)
Frame = +3
Query: 255 HLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXX 434
+LP++ T L + + V ++GT HFS S DV + ++ + P+ ++VELC+ RVS
Sbjct: 59 NLPRTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMD 118
Query: 435 XXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEM 614
A+ +KL+QAV+ L++G++ +LLK A I ++LG+APGGEFR A+ E
Sbjct: 119 ESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEA 178
Query: 615 QKIPGCKLYLGDRPIQITIARAFQSL 692
K+P CK +LGDRPI +T RA +L
Sbjct: 179 SKVPFCKFHLGDRPIPVTFKRAIAAL 204
>BC012445-1|AAH12445.1| 330|Homo sapiens TRABD protein protein.
Length = 330
Score = 117 bits (281), Expect = 5e-26
Identities = 55/130 (42%), Positives = 82/130 (63%)
Frame = +3
Query: 303 VVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXXXXXXXXXAKNFDSKKL 482
V ++GT HFS S DV + ++ + P+ ++VELC+ RVS A+ +KL
Sbjct: 29 VYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKL 88
Query: 483 KQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEMQKIPGCKLYLGDRPIQ 662
+QAV+ L++G++ +LLK A I ++LG+APGGEFR A+ E K+P CK +LGDRPI
Sbjct: 89 QQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIP 148
Query: 663 ITIARAFQSL 692
+T RA +L
Sbjct: 149 VTFKRAIAAL 158
>AL022328-7|CAB63044.1| 304|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 304
Score = 117 bits (281), Expect = 5e-26
Identities = 55/130 (42%), Positives = 82/130 (63%)
Frame = +3
Query: 303 VVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXXXXXXXXXAKNFDSKKL 482
V ++GT HFS S DV + ++ + P+ ++VELC+ RVS A+ +KL
Sbjct: 3 VYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKL 62
Query: 483 KQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEMQKIPGCKLYLGDRPIQ 662
+QAV+ L++G++ +LLK A I ++LG+APGGEFR A+ E K+P CK +LGDRPI
Sbjct: 63 QQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIP 122
Query: 663 ITIARAFQSL 692
+T RA +L
Sbjct: 123 VTFKRAIAAL 132
>AL022328-6|CAB63043.1| 309|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 309
Score = 100 bits (239), Expect = 6e-21
Identities = 46/110 (41%), Positives = 70/110 (63%)
Frame = +3
Query: 363 VKILNPNGILVELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLK 542
++ + P+ ++VELC+ RVS A+ +KL+QAV+ L++G++ +LLK
Sbjct: 28 IREVQPDVVVVELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLK 87
Query: 543 TYADIAKELGVAPGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSL 692
A I ++LG+APGGEFR A+ E K+P CK +LGDRPI +T RA +L
Sbjct: 88 VSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAAL 137
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 192 NTVQTYYSQKVLLRKKSDVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVK 368
NT+ T YS + KK + Q LPK L ++ V + S+ +EDV +I+K
Sbjct: 3094 NTLNTDYSFLEINNKKERIEQQLPKEQALSPRSQEKEVQI---PELSQVFVEDVKDILK 3149
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 192 NTVQTYYSQKVLLRKKSDVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVK 368
NT+ T YS + KK + Q LPK L ++ V + S+ +EDV +I+K
Sbjct: 3094 NTLNTDYSFLEINNKKERIEQQLPKEQALSPRSQEKEVQI---PELSQVFVEDVKDILK 3149
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 192 NTVQTYYSQKVLLRKKSDVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVK 368
NT+ T YS + KK + Q LPK L ++ V + S+ +EDV +I+K
Sbjct: 3094 NTLNTDYSFLEINNKKERIEQQLPKEQALSPRSQEKEVQI---PELSQVFVEDVKDILK 3149
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 192 NTVQTYYSQKVLLRKKSDVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVK 368
NT+ T YS + KK + Q LPK L ++ V + S+ +EDV +I+K
Sbjct: 3094 NTLNTDYSFLEINNKKERIEQQLPKEQALSPRSQEKEVQI---PELSQVFVEDVKDILK 3149
>AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein.
Length = 3060
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 192 NTVQTYYSQKVLLRKKSDVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVK 368
NT+ T YS + KK + Q LPK L ++ V + S+ +EDV +I+K
Sbjct: 2768 NTLNTDYSFLEINNKKERIEQQLPKEQALSPRSQEKEVQI---PELSQVFVEDVKDILK 2823
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 192 NTVQTYYSQKVLLRKKSDVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVK 368
NT+ T YS + KK + Q LPK L ++ V + S+ +EDV +I+K
Sbjct: 3094 NTLNTDYSFLEINNKKERIEQQLPKEQALSPRSQEKEVQI---PELSQVFVEDVKDILK 3149
>AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid antigen 1
eB protein.
Length = 3060
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 192 NTVQTYYSQKVLLRKKSDVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVK 368
NT+ T YS + KK + Q LPK L ++ V + S+ +EDV +I+K
Sbjct: 2768 NTLNTDYSFLEINNKKERIEQQLPKEQALSPRSQEKEVQI---PELSQVFVEDVKDILK 2823
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,650,909
Number of Sequences: 237096
Number of extensions: 2068303
Number of successful extensions: 3498
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3498
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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