Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13m03
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70854-4|AAP40536.1|  452|Caenorhabditis elegans Hypothetical pr...   118   3e-27
U70854-3|AAP40537.1|  450|Caenorhabditis elegans Hypothetical pr...   118   3e-27
AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine re...    32   0.45 
Z19158-5|CAJ76965.1|  237|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U23529-1|AAK39160.1|  269|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z29095-12|CAB54287.2|  414|Caenorhabditis elegans Hypothetical p...    27   9.6  
Z29095-11|CAB54286.2|  426|Caenorhabditis elegans Hypothetical p...    27   9.6  

>U70854-4|AAP40536.1|  452|Caenorhabditis elegans Hypothetical
           protein F38A5.2a protein.
          Length = 452

 Score =  118 bits (285), Expect = 3e-27
 Identities = 54/132 (40%), Positives = 82/132 (62%)
 Frame = +3

Query: 297 ATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXXXXXXXXXAKNFDSK 476
           +T+ L+GT HFSK+S EDVS  ++ + P+ +++ELC  R+S            AK+ +S+
Sbjct: 156 STIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISIISMDEARLLSEAKDLNSQ 215

Query: 477 KLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEMQKIPGCKLYLGDRP 656
           K+ Q +K    + G+LH +LL   A + +EL +APGGEFR A+        C++ LGDRP
Sbjct: 216 KIIQTMKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRAAHRAAVATENCRVVLGDRP 275

Query: 657 IQITIARAFQSL 692
           IQ+T+ RA  SL
Sbjct: 276 IQVTLQRALASL 287


>U70854-3|AAP40537.1|  450|Caenorhabditis elegans Hypothetical
           protein F38A5.2b protein.
          Length = 450

 Score =  118 bits (285), Expect = 3e-27
 Identities = 54/132 (40%), Positives = 82/132 (62%)
 Frame = +3

Query: 297 ATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSXXXXXXXXXXXXAKNFDSK 476
           +T+ L+GT HFSK+S EDVS  ++ + P+ +++ELC  R+S            AK+ +S+
Sbjct: 154 STIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISIISMDEARLLSEAKDLNSQ 213

Query: 477 KLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEMQKIPGCKLYLGDRP 656
           K+ Q +K    + G+LH +LL   A + +EL +APGGEFR A+        C++ LGDRP
Sbjct: 214 KIIQTMKQNGAIQGILHVLLLSMSAHVTRELSMAPGGEFRAAHRAAVATENCRVVLGDRP 273

Query: 657 IQITIARAFQSL 692
           IQ+T+ RA  SL
Sbjct: 274 IQVTLQRALASL 285


>AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine
           receptor, class w protein144 protein.
          Length = 357

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 172 ALSQQNQILYKHIIVKRFYYERKVMYPSIYQNLLHFCKMINKP 300
           +L Q   +L++ I  + FYYE  +   SI+ N+ HF  +I+KP
Sbjct: 21  SLCQFESLLFE-ISNRVFYYEHYLSVASIFINIFHFLILIHKP 62


>Z19158-5|CAJ76965.1|  237|Caenorhabditis elegans Hypothetical
           protein T23G5.2b protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 20  IYKSVFDTT*NKFSSILQICDEIPVFINSEIKYE 121
           IYK  F+     +      C +IP+F+ SE+ YE
Sbjct: 11  IYKHPFEIVMAAYEMRFPTCPQIPIFVGSEVTYE 44


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 20  IYKSVFDTT*NKFSSILQICDEIPVFINSEIKYE 121
           IYK  F+     +      C +IP+F+ SE+ YE
Sbjct: 11  IYKHPFEIVMAAYEMRFPTCPQIPIFVGSEVTYE 44


>U23529-1|AAK39160.1|  269|Caenorhabditis elegans Hypothetical
           protein C15B12.2 protein.
          Length = 269

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = -1

Query: 266 FW*MLGYITFLS**NLLTIICLYSIWFCCDNAFNILK*QLSSYYTYWAFHILFHY 102
           FW +L +IT+L    LL I CLY  + C  N+F        S+  Y  F + FHY
Sbjct: 62  FWYILTFITYLVWTLLLWIPCLYH-YTCRHNSFYHRHKLCRSFIRY--FSVTFHY 113


>Z29095-12|CAB54287.2|  414|Caenorhabditis elegans Hypothetical
           protein R10E11.3b protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 350 IFNRLFTEVHCTQKNDRGLFIILQKCSRFW 261
           +++ + T VHC    +RG +I L K + FW
Sbjct: 312 MYDLVATVVHCGATPNRGHYITLVKSNSFW 341


>Z29095-11|CAB54286.2|  426|Caenorhabditis elegans Hypothetical
           protein R10E11.3a protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 350 IFNRLFTEVHCTQKNDRGLFIILQKCSRFW 261
           +++ + T VHC    +RG +I L K + FW
Sbjct: 324 MYDLVATVVHCGATPNRGHYITLVKSNSFW 353


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,151,347
Number of Sequences: 27780
Number of extensions: 346700
Number of successful extensions: 909
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)