Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13m02
         (477 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89336-4|AAB47492.1|  180|Homo sapiens G16 protein.                    29   8.3  
BX284686-14|CAM26222.1|  180|Homo sapiens ring finger protein 5 ...    29   8.3  
BT007105-1|AAP35769.1|  180|Homo sapiens ring finger protein 5 p...    29   8.3  
BC127652-1|AAI27653.1|  180|Homo sapiens ring finger protein 5 p...    29   8.3  
BC127651-1|AAI27652.1|  180|Homo sapiens ring finger protein 5 p...    29   8.3  
BC119742-1|AAI19743.1|  180|Homo sapiens RNF5P1 protein protein.       29   8.3  
BC119741-1|AAI19742.1|  180|Homo sapiens ring finger protein 5 p...    29   8.3  
BC111392-1|AAI11393.1|  180|Homo sapiens RNF5 protein protein.         29   8.3  
BC004155-1|AAH04155.1|  180|Homo sapiens ring finger protein 5 p...    29   8.3  
AL845464-14|CAI41808.1|  180|Homo sapiens ring finger protein 5 ...    29   8.3  
AL662884-19|CAI18351.1|  180|Homo sapiens ring finger protein 5 ...    29   8.3  
AL662830-1|CAI17532.1|  180|Homo sapiens ring finger protein 5 p...    29   8.3  
AB056869-1|BAB39359.1|  180|Homo sapiens HsRma1 protein.               29   8.3  

>U89336-4|AAB47492.1|  180|Homo sapiens G16 protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BX284686-14|CAM26222.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BT007105-1|AAP35769.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BC127652-1|AAI27653.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BC127651-1|AAI27652.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BC119742-1|AAI19743.1|  180|Homo sapiens RNF5P1 protein protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BC119741-1|AAI19742.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BC111392-1|AAI11393.1|  180|Homo sapiens RNF5 protein protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>BC004155-1|AAH04155.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>AL845464-14|CAI41808.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>AL662884-19|CAI18351.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>AL662830-1|CAI17532.1|  180|Homo sapiens ring finger protein 5
           protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


>AB056869-1|BAB39359.1|  180|Homo sapiens HsRma1 protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 CCVCHKTPLQTRI-YHSHLFCTECFHKYIWTAPKR 316
           C +C +T  +  +    HL+C  C H+++ T P+R
Sbjct: 27  CNICLETAREAVVSVCGHLYCWPCLHQWLETRPER 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,053,988
Number of Sequences: 237096
Number of extensions: 1327912
Number of successful extensions: 2824
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2824
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)