Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13m01
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB020640-1|BAA74856.3| 1734|Homo sapiens KIAA0833 protein protein. 26 2.3
Z98884-1|CAI21433.1| 1673|Homo sapiens calmodulin binding transc... 26 2.3
Z98052-1|CAI21596.1| 1673|Homo sapiens calmodulin binding transc... 26 2.3
Z97635-1|CAI20961.1| 1673|Homo sapiens calmodulin binding transc... 26 2.3
AL596210-1|CAI17064.1| 1673|Homo sapiens calmodulin binding tran... 26 2.3
AL590128-1|CAH72347.1| 1673|Homo sapiens calmodulin binding tran... 26 2.3
AL365194-1|CAI21790.1| 1673|Homo sapiens calmodulin binding tran... 26 2.3
AL359881-1|CAH72663.1| 1673|Homo sapiens calmodulin binding tran... 26 2.3
AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette su... 30 9.8
AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette su... 30 9.8
AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A1... 30 9.8
>AB020640-1|BAA74856.3| 1734|Homo sapiens KIAA0833 protein protein.
Length = 1734
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 967 FDQISVPASLIQPGVLRCYCP 987
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 911 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 947
>Z98884-1|CAI21433.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 906 FDQISVPASLIQPGVLRCYCP 926
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 850 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 886
>Z98052-1|CAI21596.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 906 FDQISVPASLIQPGVLRCYCP 926
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 850 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 886
>Z97635-1|CAI20961.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 906 FDQISVPASLIQPGVLRCYCP 926
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 850 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 886
>AL596210-1|CAI17064.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 906 FDQISVPASLIQPGVLRCYCP 926
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 850 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 886
>AL590128-1|CAH72347.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 906 FDQISVPASLIQPGVLRCYCP 926
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 850 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 886
>AL365194-1|CAI21790.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 906 FDQISVPASLIQPGVLRCYCP 926
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 850 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 886
>AL359881-1|CAH72663.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 25.8 bits (54), Expect(2) = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 242 FGDSTVDAYLVEPGIRRLHCP 304
F +V A L++PG+ R +CP
Sbjct: 906 FDQISVPASLIQPGVLRCYCP 926
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 137 KVHSLGTVLNVLERIKHNSRISVMSPNSPDYSHPEFG 247
+V S + L ++ + R+ +++ SP++S+PE G
Sbjct: 850 EVVSAASAQGTLGMLQQSGRVFMVTDYSPEWSYPEGG 886
>AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 431 FLAHFILNIVEYYLFVEFIL*WEVSRYIVMC 523
FL F ++++ Y++F+ F L WE+ +V+C
Sbjct: 989 FLILFSIHLIYYFIFLGFQLSWELMFVLVVC 1019
>AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 431 FLAHFILNIVEYYLFVEFIL*WEVSRYIVMC 523
FL F ++++ Y++F+ F L WE+ +V+C
Sbjct: 989 FLILFSIHLIYYFIFLGFQLSWELMFVLVVC 1019
>AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A10
protein.
Length = 1543
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 431 FLAHFILNIVEYYLFVEFIL*WEVSRYIVMC 523
FL F ++++ Y++F+ F L WE+ +V+C
Sbjct: 989 FLILFSIHLIYYFIFLGFQLSWELMFVLVVC 1019
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,961,959
Number of Sequences: 237096
Number of extensions: 1910177
Number of successful extensions: 3105
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3105
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -