Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13m01
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57475-1|CAA40713.1|  700|Drosophila melanogaster non-claret  di...    31   2.1  
X52814-1|CAA36998.1|  700|Drosophila melanogaster claret  segreg...    31   2.1  
M33932-1|AAA28716.1|  685|Drosophila melanogaster protein ( D.me...    31   2.1  
AY729989-1|AAV34672.1|  535|Drosophila melanogaster kinesin-like...    31   2.1  
AY058596-1|AAL13825.1|  700|Drosophila melanogaster LD29131p pro...    31   2.1  
AE014297-4446|AAF56942.1|  700|Drosophila melanogaster CG7831-PA...    31   2.1  
AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-P...    31   2.1  
AE014298-1770|AAF48165.1|  254|Drosophila melanogaster CG17788-P...    30   3.7  

>X57475-1|CAA40713.1|  700|Drosophila melanogaster non-claret
           disjunctional (ncd)kinesin-related microtubule  motor
           protein protein.
          Length = 700

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 601 NHNNVYLANSKDELVLDFTHLNHII 527
           N N++Y++N  +E VLD  HL H++
Sbjct: 508 NKNDIYVSNITEETVLDPNHLRHLM 532


>X52814-1|CAA36998.1|  700|Drosophila melanogaster claret
           segregational product,claret disjunctin protein.
          Length = 700

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 601 NHNNVYLANSKDELVLDFTHLNHII 527
           N N++Y++N  +E VLD  HL H++
Sbjct: 508 NKNDIYVSNITEETVLDPNHLRHLM 532


>M33932-1|AAA28716.1|  685|Drosophila melanogaster protein (
           D.melanogaster non-claretdisjunctional protein (ncd)
           mRNA, complete cds. ).
          Length = 685

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 601 NHNNVYLANSKDELVLDFTHLNHII 527
           N N++Y++N  +E VLD  HL H++
Sbjct: 493 NKNDIYVSNITEETVLDPNHLRHLM 517


>AY729989-1|AAV34672.1|  535|Drosophila melanogaster kinesin-like
           motor protein protein.
          Length = 535

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 601 NHNNVYLANSKDELVLDFTHLNHII 527
           N N++Y++N  +E VLD  HL H++
Sbjct: 508 NKNDIYVSNITEETVLDPNHLRHLM 532


>AY058596-1|AAL13825.1|  700|Drosophila melanogaster LD29131p
           protein.
          Length = 700

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 601 NHNNVYLANSKDELVLDFTHLNHII 527
           N N++Y++N  +E VLD  HL H++
Sbjct: 508 NKNDIYVSNITEETVLDPNHLRHLM 532


>AE014297-4446|AAF56942.1|  700|Drosophila melanogaster CG7831-PA
           protein.
          Length = 700

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 601 NHNNVYLANSKDELVLDFTHLNHII 527
           N N++Y++N  +E VLD  HL H++
Sbjct: 508 NKNDIYVSNITEETVLDPNHLRHLM 532


>AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-PA
           protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -2

Query: 409 NIEIFVSTKTAMFCGQMTSQWHEFLVDVSFPKFRLWTVQSPN 284
           N+ +F+S    +   Q+   W++ ++D+ F  FR+W+    N
Sbjct: 247 NVHLFLSALLTLL--QVLVVWYKMIIDLGFSDFRIWSFSLKN 286


>AE014298-1770|AAF48165.1|  254|Drosophila melanogaster CG17788-PA
           protein.
          Length = 254

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 216 TLRTIHTRNSATQQLTHILLNPEFGDCTVQRRNLGNETSTKNSCHC 353
           +L  +HT  + TQQ  + + N   G   V  +N+ N  S KNS  C
Sbjct: 56  SLPLVHT--TTTQQNNNNVNNNNNGSLVVSAKNMANNKSNKNSSKC 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,534,483
Number of Sequences: 53049
Number of extensions: 606008
Number of successful extensions: 1127
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)