Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13l18
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein. 62 1e-09
CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein. 62 1e-09
BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated pr... 62 1e-09
BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated pr... 62 1e-09
AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein. 62 1e-09
BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated pr... 61 3e-09
BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein. 50 6e-06
BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein. 50 6e-06
BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein. 50 6e-06
AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated tra... 50 6e-06
AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated tr... 50 6e-06
AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens ... 50 6e-06
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 50 6e-06
AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated tr... 50 6e-06
AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated tr... 50 6e-06
AC079145-1|AAX88938.1| 196|Homo sapiens unknown protein. 44 7e-04
AY464186-1|AAS46603.1| 281|Homo sapiens complement inhibitory r... 42 0.002
AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein. 41 0.004
AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated pro... 40 0.006
AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated pro... 40 0.006
AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein. 40 0.006
U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated mult... 36 0.10
U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein. 36 0.10
D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein. 36 0.10
BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated mu... 36 0.10
BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated mu... 36 0.10
AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated mu... 36 0.10
AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated mu... 36 0.10
AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein. 30 9.0
AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein. 30 9.0
AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein ... 30 9.0
>D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein.
Length = 254
Score = 62.5 bits (145), Expect = 1e-09
Identities = 42/148 (28%), Positives = 74/148 (50%)
Frame = +3
Query: 237 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 416
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 32 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 91
Query: 417 SNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALTLIMIYGAARGKPAYL 596
+ R D L V L+++ ++ +++YGA + +L
Sbjct: 92 YSSERMAD-NACVLFAVSV----------------LMFI----ISSMLVYGAISYQVGWL 130
Query: 597 LPFFCLQIFDFAITILTATGYLCYLRQI 680
+PFFC ++FDF ++ L A L YL +I
Sbjct: 131 IPFFCYRLFDFVLSCLVAISSLTYLPRI 158
>CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein.
Length = 233
Score = 62.5 bits (145), Expect = 1e-09
Identities = 42/148 (28%), Positives = 74/148 (50%)
Frame = +3
Query: 237 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 416
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 417 SNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALTLIMIYGAARGKPAYL 596
+ R D L V L+++ ++ +++YGA + +L
Sbjct: 71 YSSERMAD-NACVLFAVSV----------------LMFI----ISSMLVYGAISYQVGWL 109
Query: 597 LPFFCLQIFDFAITILTATGYLCYLRQI 680
+PFFC ++FDF ++ L A L YL +I
Sbjct: 110 IPFFCYRLFDFVLSCLVAISSLTYLPRI 137
>BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 62.5 bits (145), Expect = 1e-09
Identities = 42/148 (28%), Positives = 74/148 (50%)
Frame = +3
Query: 237 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 416
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 417 SNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALTLIMIYGAARGKPAYL 596
+ R D L V L+++ ++ +++YGA + +L
Sbjct: 71 YSSERMAD-NACVLFAVSV----------------LMFI----ISSMLVYGAISYQVGWL 109
Query: 597 LPFFCLQIFDFAITILTATGYLCYLRQI 680
+PFFC ++FDF ++ L A L YL +I
Sbjct: 110 IPFFCYRLFDFVLSCLVAISSLTYLPRI 137
>BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 62.5 bits (145), Expect = 1e-09
Identities = 42/148 (28%), Positives = 74/148 (50%)
Frame = +3
Query: 237 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 416
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 417 SNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALTLIMIYGAARGKPAYL 596
+ R D L V L+++ ++ +++YGA + +L
Sbjct: 71 YSSERMAD-NACVLFAVSV----------------LMFI----ISSMLVYGAISYQVGWL 109
Query: 597 LPFFCLQIFDFAITILTATGYLCYLRQI 680
+PFFC ++FDF ++ L A L YL +I
Sbjct: 110 IPFFCYRLFDFVLSCLVAISSLTYLPRI 137
>AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein.
Length = 215
Score = 62.5 bits (145), Expect = 1e-09
Identities = 42/148 (28%), Positives = 74/148 (50%)
Frame = +3
Query: 237 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 416
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 417 SNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALTLIMIYGAARGKPAYL 596
+ R D L V L+++ ++ +++YGA + +L
Sbjct: 71 YSSERMAD-NACVLFAVSV----------------LMFI----ISSMLVYGAISYQVGWL 109
Query: 597 LPFFCLQIFDFAITILTATGYLCYLRQI 680
+PFFC ++FDF ++ L A L YL +I
Sbjct: 110 IPFFCYRLFDFVLSCLVAISSLTYLPRI 137
>BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/148 (27%), Positives = 74/148 (50%)
Frame = +3
Query: 237 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 416
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 417 SNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALTLIMIYGAARGKPAYL 596
+ R D L V L+++ ++ +++YG+ + +L
Sbjct: 71 YSSERMAD-NACVLFAVSV----------------LMFI----ISSMLVYGSISYQVGWL 109
Query: 597 LPFFCLQIFDFAITILTATGYLCYLRQI 680
+PFFC ++FDF ++ L A L YL +I
Sbjct: 110 IPFFCYRLFDFVLSCLVAISSLTYLPRI 137
>BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein.
Length = 317
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 182 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 224
>BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 133
>BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 133
>AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated
transmembrane protein 4 beta protein.
Length = 370
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 159 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 194
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 235 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 277
>AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta, variant 1 protein.
Length = 317
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 182 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 224
>AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens
cDNA PSEC0001 fis, clone NT2RM1000066, moderately
similar to Lysosomal-associated transmembrane protein 4
beta. ).
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 133
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 72 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 107
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 148 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 190
>AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta variant 2 protein.
Length = 317
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 182 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 224
>AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated
transmembrane protein 4 beta protein.
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 368
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 564 YGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
YGA + + A+++PFFC QIFDFA+ +L A L Y I I
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI 133
>AC079145-1|AAX88938.1| 196|Homo sapiens unknown protein.
Length = 196
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQI 680
++ +++YGA + +L+PFFC ++FDF ++ L A L YL +I
Sbjct: 56 ISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRI 100
>AY464186-1|AAS46603.1| 281|Homo sapiens complement inhibitory
receptor protein.
Length = 281
Score = 41.9 bits (94), Expect = 0.002
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 537 TMALTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATGYLCYLRQIHALI 692
++A M++GA +P +LLPFF +Q+FD I ++ G++ + +I
Sbjct: 36 SLAFCCFMVHGAITKQPTHLLPFFFIQVFDLTICLIHILGFMSSTSDLRLMI 87
>AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein.
Length = 38
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 237 SERGSEWLCCFCLHVRTGTIILGSWHL 317
S+R CC C HVRTGTIILG+W++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYM 37
>AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHL 317
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHL 317
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 261 CCFCLHVRTGTIILGSWHL 317
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated
multitransmembrane protein protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 656
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 656
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein.
Length = 269
Score = 36.3 bits (80), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 656
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 83 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 119
>BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 656
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 656
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 656
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 36.3 bits (80), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 546 LTLIMIYGAARGKPAYLLPFFCLQIFDFAITILTATG 656
++L ++ G + + YLLPF LQI D+ + +LT G
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLG 112
>AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 9.0
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +3
Query: 372 LLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALT 551
L E ES P S SNV V +PL N + SP + + PS LI+ L
Sbjct: 1135 LESESGPESVPPGSLSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSVLV 1194
Query: 552 L 554
L
Sbjct: 1195 L 1195
>AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 9.0
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +3
Query: 372 LLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALT 551
L E ES P S SNV V +PL N + SP + + PS LI+ L
Sbjct: 1135 LESESGPESVPPGSLSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSVLV 1194
Query: 552 L 554
L
Sbjct: 1195 L 1195
>AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein 1
protein.
Length = 1440
Score = 29.9 bits (64), Expect = 9.0
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +3
Query: 372 LLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYLGTMALT 551
L E ES P S SNV V +PL N + SP + + PS LI+ L
Sbjct: 1135 LESESGPESVPPGSLSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSVLV 1194
Query: 552 L 554
L
Sbjct: 1195 L 1195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,793,024
Number of Sequences: 237096
Number of extensions: 2707984
Number of successful extensions: 5789
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5787
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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