Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13l10
         (471 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003389-8|AAC71131.1|  214|Caenorhabditis elegans Hypothetical ...    28   3.9  
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    27   6.8  

>AF003389-8|AAC71131.1|  214|Caenorhabditis elegans Hypothetical
           protein F23H11.1 protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 311 SEYCKENLLLTRKMYQYWN--NPNVYHCIKNHLFCS 412
           +E  K  L+ +RK    W+  N  +YHC  N  +CS
Sbjct: 135 NEKHKRELVASRKKQWCWSCDNEAIYHCCWNTAYCS 170


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 419 EDDCKIGDS*CNDIHWDCSNTDTFSELAINSPYNILMWISIFNL 288
           +DD   GD+  +D+++DC++T   S +    P +I+ W S   L
Sbjct: 273 DDDMDAGDAVSDDLYFDCTDT---SPIPTQKP-SIIRWSSELEL 312


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 419 EDDCKIGDS*CNDIHWDCSNTDTFSELAINSPYNILMWISIFNL 288
           +DD   GD+  +D+++DC++T   S +    P +I+ W S   L
Sbjct: 273 DDDMDAGDAVSDDLYFDCTDT---SPIPTQKP-SIIRWSSELEL 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,901,515
Number of Sequences: 27780
Number of extensions: 166172
Number of successful extensions: 375
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)