Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13l05
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated ub... 146 8e-35
AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific prot... 146 8e-35
BC071613-1|AAH71613.1| 392|Homo sapiens hypothetical protein LO... 34 0.38
AK021919-1|BAB13937.1| 391|Homo sapiens protein ( Homo sapiens ... 34 0.38
BC003385-1|AAH03385.1| 374|Homo sapiens speckle-type POZ protei... 33 0.66
BC001269-1|AAH01269.1| 374|Homo sapiens speckle-type POZ protei... 33 0.66
AK222589-1|BAD96309.1| 374|Homo sapiens speckle-type POZ protei... 33 0.66
AJ000644-1|CAA04199.1| 374|Homo sapiens SPOP protein. 33 0.66
AB199796-1|BAF43710.1| 675|Homo sapiens hypothetical protein pr... 32 2.0
DQ867088-1|ABH85399.1| 976|Homo sapiens poly (ADP-ribose) glyco... 31 4.7
BC052966-1|AAH52966.1| 976|Homo sapiens PARG protein protein. 31 4.7
BC050560-1|AAH50560.1| 976|Homo sapiens poly (ADP-ribose) glyco... 31 4.7
AY575849-1|AAT66422.1| 868|Homo sapiens poly (ADP-ribose) glyco... 31 4.7
AY575848-1|AAT66421.1| 894|Homo sapiens poly (ADP-ribose) glyco... 31 4.7
AY258587-1|AAP83314.1| 976|Homo sapiens poly(ADP-ribose) glycoh... 31 4.7
>Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated
ubiquitin-specific protease (HAUSP) protein.
Length = 1102
Score = 146 bits (353), Expect = 8e-35
Identities = 69/165 (41%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Frame = +3
Query: 162 IEASSVDNATAPLPINHDFTPQD--EDMA-RSEATFRFIVQNVSELKEQVLSPACYVRCL 332
I + V N L H+ +D +D + RSEATF+F V+ S L E VLSP C+VR L
Sbjct: 36 ITQNPVINGNVALSDGHNTAEEDMEDDTSWRSEATFQFTVERFSRLSESVLSPPCFVRNL 95
Query: 333 PWKILVLVRNTTRNDHQPHKALGVFLQCNGECSSPGWSCYGLGELKLLSYKPEGTHLCRK 512
PWKI+V+ R HQ K++G FLQCN E S WSC+ LK+++Y+ + R+
Sbjct: 96 PWKIMVMPRFYPDRPHQ--KSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFSRR 153
Query: 513 IHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHVIAE 647
I H++ KE+DWGF++F+AW ++ +P+ GF+ +D +T E V A+
Sbjct: 154 ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQAD 198
>AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific
protease 7 isoform protein.
Length = 1112
Score = 146 bits (353), Expect = 8e-35
Identities = 69/165 (41%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Frame = +3
Query: 162 IEASSVDNATAPLPINHDFTPQD--EDMA-RSEATFRFIVQNVSELKEQVLSPACYVRCL 332
I + V N L H+ +D +D + RSEATF+F V+ S L E VLSP C+VR L
Sbjct: 46 ITQNPVINGNVALSDGHNTAEEDMEDDTSWRSEATFQFTVERFSRLSESVLSPPCFVRNL 105
Query: 333 PWKILVLVRNTTRNDHQPHKALGVFLQCNGECSSPGWSCYGLGELKLLSYKPEGTHLCRK 512
PWKI+V+ R HQ K++G FLQCN E S WSC+ LK+++Y+ + R+
Sbjct: 106 PWKIMVMPRFYPDRPHQ--KSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFSRR 163
Query: 513 IHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHVIAE 647
I H++ KE+DWGF++F+AW ++ +P+ GF+ +D +T E V A+
Sbjct: 164 ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQAD 208
>BC071613-1|AAH71613.1| 392|Homo sapiens hypothetical protein
LOC339745 protein.
Length = 392
Score = 34.3 bits (75), Expect = 0.38
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 462 ELKLLSYKPEGTHLCRKIHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHV 638
+ LL+ K E T + DWGF FI D L++ NG + +D +TL V
Sbjct: 103 KFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
>AK021919-1|BAB13937.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ11857 fis, clone HEMBA1006807, moderately
similar to Homo sapiens mRNA for SPOP. ).
Length = 391
Score = 34.3 bits (75), Expect = 0.38
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 462 ELKLLSYKPEGTHLCRKIHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHV 638
+ LL+ K E T + DWGF FI D L++ NG + +D +TL V
Sbjct: 103 KFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
>BC003385-1|AAH03385.1| 374|Homo sapiens speckle-type POZ protein
protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.66
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 462 ELKLLSYKPEGTHLCRKIHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHV 638
+ +L+ K E T + DWGF FI D L++ NG + +D +TL V
Sbjct: 103 KFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
>BC001269-1|AAH01269.1| 374|Homo sapiens speckle-type POZ protein
protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.66
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 462 ELKLLSYKPEGTHLCRKIHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHV 638
+ +L+ K E T + DWGF FI D L++ NG + +D +TL V
Sbjct: 103 KFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
>AK222589-1|BAD96309.1| 374|Homo sapiens speckle-type POZ protein
variant protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.66
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 462 ELKLLSYKPEGTHLCRKIHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHV 638
+ +L+ K E T + DWGF FI D L++ NG + +D +TL V
Sbjct: 103 KFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
>AJ000644-1|CAA04199.1| 374|Homo sapiens SPOP protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.66
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 462 ELKLLSYKPEGTHLCRKIHHMYHCKEDDWGFAHFIAWDDLMNPDNGFVKNDSITLEAHV 638
+ +L+ K E T + DWGF FI D L++ NG + +D +TL V
Sbjct: 103 KFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
>AB199796-1|BAF43710.1| 675|Homo sapiens hypothetical protein
protein.
Length = 675
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 287 VERASAIPGVLRALSALEDLGSRTQHYEKRSPTTQSFRRIPSVQRRMQFA 436
V ASA P + RA+SAL+D+ + Y+ R + ++ + R + A
Sbjct: 187 VPDASAYPVLQRAVSALQDVNTNINEYKMRKEVASKYTKVEQLTLRERLA 236
>DQ867088-1|ABH85399.1| 976|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 227 RRRYGPFGG----HFPFYS--SKCQRVERASAIPGVLRALSALEDLGSRTQHYEKRSPTT 388
R+RY GG HF F S+ + + +PG + +L+ + + QH +K S T
Sbjct: 354 RKRYSTKGGEVRLHFQFEGGESRTGMNDLNAKLPGNISSLNV--ECRNSKQHGKKDSKIT 411
Query: 389 QSFRRIPSVQRRMQFAW 439
F R+P + R + W
Sbjct: 412 DHFMRLPKAEDRRKEQW 428
>BC052966-1|AAH52966.1| 976|Homo sapiens PARG protein protein.
Length = 976
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 227 RRRYGPFGG----HFPFYS--SKCQRVERASAIPGVLRALSALEDLGSRTQHYEKRSPTT 388
R+RY GG HF F S+ + + +PG + +L+ + + QH +K S T
Sbjct: 354 RKRYSTKGGEVRLHFQFEGGESRTGMNDLNAKLPGNISSLNV--ECRNSKQHGKKDSKIT 411
Query: 389 QSFRRIPSVQRRMQFAW 439
F R+P + R + W
Sbjct: 412 DHFMRLPKAEDRRKEQW 428
>BC050560-1|AAH50560.1| 976|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 227 RRRYGPFGG----HFPFYS--SKCQRVERASAIPGVLRALSALEDLGSRTQHYEKRSPTT 388
R+RY GG HF F S+ + + +PG + +L+ + + QH +K S T
Sbjct: 354 RKRYSTKGGEVRLHFQFEGGESRTGMNDLNAKLPGNISSLNV--ECRNSKQHGKKDSKIT 411
Query: 389 QSFRRIPSVQRRMQFAW 439
F R+P + R + W
Sbjct: 412 DHFMRLPKAEDRRKEQW 428
>AY575849-1|AAT66422.1| 868|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 868
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 227 RRRYGPFGG----HFPFYS--SKCQRVERASAIPGVLRALSALEDLGSRTQHYEKRSPTT 388
R+RY GG HF F S+ + + +PG + +L+ + + QH +K S T
Sbjct: 246 RKRYSTKGGEVRLHFQFEGGESRTGMNDLNAKLPGNISSLNV--ECRNSKQHGKKDSKIT 303
Query: 389 QSFRRIPSVQRRMQFAW 439
F R+P + R + W
Sbjct: 304 DHFMRLPKAEDRRKEQW 320
>AY575848-1|AAT66421.1| 894|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 894
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 227 RRRYGPFGG----HFPFYS--SKCQRVERASAIPGVLRALSALEDLGSRTQHYEKRSPTT 388
R+RY GG HF F S+ + + +PG + +L+ + + QH +K S T
Sbjct: 272 RKRYSTKGGEVRLHFQFEGGESRTGMNDLNAKLPGNISSLNV--ECRNSKQHGKKDSKIT 329
Query: 389 QSFRRIPSVQRRMQFAW 439
F R+P + R + W
Sbjct: 330 DHFMRLPKAEDRRKEQW 346
>AY258587-1|AAP83314.1| 976|Homo sapiens poly(ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 227 RRRYGPFGG----HFPFYS--SKCQRVERASAIPGVLRALSALEDLGSRTQHYEKRSPTT 388
R+RY GG HF F S+ + + +PG + +L+ + + QH +K S T
Sbjct: 354 RKRYSTKGGEVRLHFQFEGGESRTGMNDLNAKLPGNISSLNV--ECRNSKQHGKKDSKIT 411
Query: 389 QSFRRIPSVQRRMQFAW 439
F R+P + R + W
Sbjct: 412 DHFMRLPKAEDRRKEQW 428
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,115,215
Number of Sequences: 237096
Number of extensions: 2130457
Number of successful extensions: 4247
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4244
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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