Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13l03
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   3.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   3.9  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   6.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   6.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   9.0  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +1

Query: 88  WCSPRRTWPAHAQRHPWQP 144
           W     T P H   HPW P
Sbjct: 530 WNPLTDTVPIHTWIHPWLP 548


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 246 GGESKRRLGATACGW 290
           GG+S  R     CGW
Sbjct: 569 GGDSLERFDFCGCGW 583


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 130 HPWQPARQPKFTSQYNGLRVNCS 198
           H + P RQP   +Q   +  +CS
Sbjct: 22  HVYHPYRQPDGMNQCQAVNGHCS 44


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 130 HPWQPARQPKFTSQYNGLRVNCS 198
           H + P RQP   +Q   +  +CS
Sbjct: 22  HVYHPYRQPDGMNQCQAVNGHCS 44


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 95  EHHHGPQPRPRVAPTDRPSHMTQP 24
           E +  P P PR+A     S  + P
Sbjct: 506 ETNSSPSPNPRIASAPSSSTSSSP 529


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -1

Query: 92  HHHGPQPRPRVAPTDRPSHMTQPECLRLG 6
           H+   Q   ++ PT R +H+      R+G
Sbjct: 371 HYSNGQTHSQLCPTPRSTHLKVSGINRVG 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,360
Number of Sequences: 438
Number of extensions: 1170
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)