Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13l02
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81050-5|CAB02855.2| 367|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical p... 28 6.6
Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical p... 28 6.6
Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical pr... 28 6.6
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 28 6.6
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 27 8.7
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 27 8.7
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 27 8.7
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 27 8.7
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 27 8.7
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 362 NRPKVWRTIPYSRSAAGILRSASSFSGSNQEHPVLCEGHWRIPQRARTSVRAR 520
NRP+ + SRS++ S+ S S S++ R PQR+RTS R R
Sbjct: 87 NRPEASKRSRRSRSSSN--SSSESDSSSSRSSSYSSRSRSRTPQRSRTSKRRR 137
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 261 IACGSMTTDE---EEIDPVGNATSNVNSVDPGQ-FATKIDQRYGGQYLTPDQLPE 413
+ C S T ++ EE+DP G AT +++ F TK D+ G+ L Q+PE
Sbjct: 262 LGCASFTGEDPLPEELDPTGCATFTSENLEVKTCFKTK-DKAAVGRALASKQIPE 315
>Z81050-5|CAB02855.2| 367|Caenorhabditis elegans Hypothetical
protein C50B6.6 protein.
Length = 367
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 195 DHHKYNLLDKRFSVTSSGVSENIACGSMTTDEEEIDPV 308
DH+K +L DK + G+S ++ C ++ T IDPV
Sbjct: 173 DHYKQDLYDK-----NPGISIHVLCNTVVTAPPLIDPV 205
>Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical
protein F13H10.4c protein.
Length = 792
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 520 RPEKWLHWPR--KHGTHGTSYRARGHKGKLCAHRRSKFLLNSI 642
R EKW HW R + G T+YR RG + K L + +
Sbjct: 487 RLEKWFHWIRITQSGPTRTTYRWRGRNETIKTELNPKTLSSGL 529
>Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical
protein F13H10.4b protein.
Length = 789
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 520 RPEKWLHWPR--KHGTHGTSYRARGHKGKLCAHRRSKFLLNSI 642
R EKW HW R + G T+YR RG + K L + +
Sbjct: 484 RLEKWFHWIRITQSGPTRTTYRWRGRNETIKTELNPKTLSSGL 526
>Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical
protein F13H10.4a protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 520 RPEKWLHWPR--KHGTHGTSYRARGHKGKLCAHRRSKFLLNSI 642
R EKW HW R + G T+YR RG + K L + +
Sbjct: 491 RLEKWFHWIRITQSGPTRTTYRWRGRNETIKTELNPKTLSSGL 533
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 230 KSFIKQVVLVMVTSESTEKPAEETGLPPTALHYSTPI 120
K +K V+V+ ++ EKPA TG P + PI
Sbjct: 487 KMLVKNKVVVVNQHQAQEKPANSTGFPRPIIPIPWPI 523
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 249 VSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQF 353
V + I G T+D P+ ATS+++ P QF
Sbjct: 147 VLDGIGHGVRTSDPPRAAPISRATSSISGSSPSQF 181
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 261 IACGSMTTDE---EEIDPVGNATSNVNSVDPGQ-FATKIDQRYGGQYLTPDQLPE 413
+ C S T ++ EE+DP G AT +++ F TK D+ G+ L Q+PE
Sbjct: 262 LGCASFTGEDPLPEELDPTGCATFTSENLEVKTCFKTK-DKAAVGRALASKQIPE 315
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 204 CDGHLGVYREAC*GDGTASHRPPLFHPNF 118
C LGVY E GTA R P+ P F
Sbjct: 54 CTQQLGVYNETSCPGGTACERFPILIPGF 82
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 337 TELTLEVALPTGSISSSSVVMLPQAIFSLTPED 239
TE+ ++A +S ++ MLP ++S +PE+
Sbjct: 369 TEILFKIAQEARGLSGRAISMLPTLVYSKSPEE 401
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +3
Query: 549 EARNARDVVSRTRTQRKAVRAQKKQVLAQLNNLR 650
E R+A+D+++ + +R + Q K+++ +LNN R
Sbjct: 123 ELRSAKDLIADSDKERAQLEDQIKKLVEELNNYR 156
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +3
Query: 549 EARNARDVVSRTRTQRKAVRAQKKQVLAQLNNLR 650
E R+A+D+++ + +R + Q K+++ +LNN R
Sbjct: 104 ELRSAKDLIADSDKERAQLEDQIKKLVEELNNYR 137
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = +3
Query: 231 SVTSSGVSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQFATKIDQRYGGQYLTPDQLP 410
S +G+ + A S+ + + + N N PG + +ID+ P Q+P
Sbjct: 15 SGAEAGILSSDASSSILLPASGTEAISQLSKNSNIKQPGTWLYRIDKAQLMPCAQPIQVP 74
Query: 411 EFCAQL 428
+C +L
Sbjct: 75 PYCDRL 80
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = +3
Query: 231 SVTSSGVSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQFATKIDQRYGGQYLTPDQLP 410
S +G+ + A S+ + + + N N PG + +ID+ P Q+P
Sbjct: 565 SGAEAGILSSDASSSILLPASGTEAISQLSKNSNIKQPGTWLYRIDKAQLMPCAQPIQVP 624
Query: 411 EFCAQL 428
+C +L
Sbjct: 625 PYCDRL 630
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = +3
Query: 231 SVTSSGVSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQFATKIDQRYGGQYLTPDQLP 410
S +G+ + A S+ + + + N N PG + +ID+ P Q+P
Sbjct: 565 SGAEAGILSSDASSSILLPASGTEAISQLSKNSNIKQPGTWLYRIDKAQLMPCAQPIQVP 624
Query: 411 EFCAQL 428
+C +L
Sbjct: 625 PYCDRL 630
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 194 TSESTEKPA-EETGLPPTALHYSTPIFIS*TE*YCRNGYI 78
T+ STE P +E T L +TP S TE + R G+I
Sbjct: 887 TTSSTEPPTTQEESNTTTTLSSTTPFTTSSTESFTRGGFI 926
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,357,582
Number of Sequences: 27780
Number of extensions: 257825
Number of successful extensions: 824
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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