Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13l02
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   4.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.8  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/30 (26%), Positives = 12/30 (40%)
 Frame = +1

Query: 538 HWPRKHGTHGTSYRARGHKGKLCAHRRSKF 627
           H    H  H   +   GH G LC   + ++
Sbjct: 275 HLDNHHVHHANHHAILGHSGFLCERHQKRY 304


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 50  NHINKFNKKKCNHSGNIIQ 106
           NH+  + K+  N  GNI+Q
Sbjct: 348 NHVKLYTKQGLNVLGNIVQ 366


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 50  NHINKFNKKKCNHSGNIIQ 106
           NH+  + K+  N  GNI+Q
Sbjct: 348 NHVKLYTKQGLNVLGNIVQ 366


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 395 SKVLSAIPLVYFSGELSWINRIDVRSSIAYRIYFF 291
           S V++   +V  +GE+ W++    RSS    + FF
Sbjct: 104 SAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFF 138


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -2

Query: 352 NCPGSTELTLEVALPTGSISSSSVVMLPQAIF 257
           N PG T + ++ +    +I + S+++   A+F
Sbjct: 551 NIPGDTSIIVDSSTSGATIVNYSIMIFLSAVF 582


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,841
Number of Sequences: 438
Number of extensions: 2922
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)