Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13k23
(744 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 3.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.0
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 5.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 5.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 5.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 7.0
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.0 bits (47), Expect = 3.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 297 TMDIELISHHYFVHIVSYFVLTGAAICYIFIVTALRSLR 181
+M LI H + + + +FVL I ++I+ A++ R
Sbjct: 212 SMKWTLIEHAFEISTMLFFVLPMTIIIVLYILIAIKLRR 250
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 QVAESNSEGTKGSNYENVANSSSSEYK 243
++ S S K SNY N N+ ++ YK
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYK 106
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 QVAESNSEGTKGSNYENVANSSSSEYK 243
++ S S K SNY N N+ ++ YK
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYK 106
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 QVAESNSEGTKGSNYENVANSSSSEYK 243
++ S S K SNY N N+ ++ YK
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYK 106
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 QVAESNSEGTKGSNYENVANSSSSEYK 243
++ S S K SNY N N+ ++ YK
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYK 106
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 QVAESNSEGTKGSNYENVANSSSSEYK 243
++ S S K SNY N N+ ++ YK
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYK 106
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 QVAESNSEGTKGSNYENVANSSSSEYK 243
++ S S K SNY N N+ ++ YK
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYK 106
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 QVAESNSEGTKGSNYENVANSSSSEYK 243
++ S S K SNY N N+ ++ YK
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYK 106
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 379 VLKHYSRNWVYLRQCSCIIL 320
+ KHY R W +L S I L
Sbjct: 160 IAKHYLRTWFFLDLISSIPL 179
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 379 VLKHYSRNWVYLRQCSCIIL 320
+ KHY R W +L S I L
Sbjct: 160 IAKHYLRTWFFLDLISSIPL 179
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 379 VLKHYSRNWVYLRQCSCIIL 320
+ KHY R W +L S I L
Sbjct: 160 IAKHYLRTWFFLDLISSIPL 179
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 439 SEISEINSAEDLHNVFMANKKRIDL 513
SEI ++ + D+ N A KK+ID+
Sbjct: 1360 SEIDNLDVSLDVSNPKNAGKKKIDV 1384
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,524
Number of Sequences: 438
Number of extensions: 3628
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -