Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13k13
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC128233-1|AAI28234.1| 284|Homo sapiens caudal type homeobox 4 ... 32 2.1
AL450108-1|CAI40795.1| 284|Homo sapiens caudal type homeobox tr... 32 2.1
AF029879-1|AAD01894.1| 284|Homo sapiens caudal-4 protein. 32 2.1
AF003530-1|AAB66319.1| 284|Homo sapiens homeobox protein CDX4 p... 32 2.1
X07384-1|CAA30297.1| 1106|Homo sapiens protein ( Human mRNA for ... 30 8.5
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 30 8.5
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 30 8.5
BC013000-1|AAH13000.1| 1106|Homo sapiens glioma-associated oncog... 30 8.5
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 30 8.5
AL833963-1|CAD38811.1| 453|Homo sapiens hypothetical protein pr... 30 8.5
AF316573-1|AAM13391.1| 1106|Homo sapiens GLI1 protein. 30 8.5
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 30 8.5
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 30 8.5
>BC128233-1|AAI28234.1| 284|Homo sapiens caudal type homeobox 4
protein.
Length = 284
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 457 PTLCSWRSDYPPPXVQSWSYYPLPSDLFG 371
P+L W S Y PP + WS YP PS G
Sbjct: 67 PSLGVWGSPYSPPR-EDWSVYPGPSSTMG 94
>AL450108-1|CAI40795.1| 284|Homo sapiens caudal type homeobox
transcription factor 4 protein.
Length = 284
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 457 PTLCSWRSDYPPPXVQSWSYYPLPSDLFG 371
P+L W S Y PP + WS YP PS G
Sbjct: 67 PSLGVWGSPYSPPR-EDWSVYPGPSSTMG 94
>AF029879-1|AAD01894.1| 284|Homo sapiens caudal-4 protein.
Length = 284
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 457 PTLCSWRSDYPPPXVQSWSYYPLPSDLFG 371
P+L W S Y PP + WS YP PS G
Sbjct: 67 PSLGVWGSPYSPPR-EDWSVYPGPSSTMG 94
>AF003530-1|AAB66319.1| 284|Homo sapiens homeobox protein CDX4
protein.
Length = 284
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 457 PTLCSWRSDYPPPXVQSWSYYPLPSDLFG 371
P+L W S Y PP + WS YP PS G
Sbjct: 67 PSLGVWGSPYSPPR-EDWSVYPGPSSTMG 94
>X07384-1|CAA30297.1| 1106|Homo sapiens protein ( Human mRNA for GLI
protein. ).
Length = 1106
Score = 29.9 bits (64), Expect = 8.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 457 PTLCSWRSDYPPPXVQSWSYYPLPSDLFGNPNYL 356
P C ++ YP P ++W +P S L+ P L
Sbjct: 763 PNPCPQQASYPDPTQETWGEFPSHSGLYPGPKAL 796
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 334 RELAEMYKDNSDYQTDRSEADSSSTTVHXEEGNLIARSRASGFKFQP 474
RE+ E +D+ + +D SEA+ S H EE + S AS + P
Sbjct: 347 REVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAP 393
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 334 RELAEMYKDNSDYQTDRSEADSSSTTVHXEEGNLIARSRASGFKFQP 474
RE+ E +D+ + +D SEA+ S H EE + S AS + P
Sbjct: 106 REVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAP 152
>BC013000-1|AAH13000.1| 1106|Homo sapiens glioma-associated oncogene
homolog 1 (zinc finger protein) protein.
Length = 1106
Score = 29.9 bits (64), Expect = 8.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 457 PTLCSWRSDYPPPXVQSWSYYPLPSDLFGNPNYL 356
P C ++ YP P ++W +P S L+ P L
Sbjct: 763 PNPCPQQASYPDPTQETWGEFPSHSGLYPGPKAL 796
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 334 RELAEMYKDNSDYQTDRSEADSSSTTVHXEEGNLIARSRASGFKFQP 474
RE+ E +D+ + +D SEA+ S H EE + S AS + P
Sbjct: 347 REVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAP 393
>AL833963-1|CAD38811.1| 453|Homo sapiens hypothetical protein
protein.
Length = 453
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 484 CSNLVET*SPTLCSWRSDYPPPXVQSWSYYPLPS 383
C + T SPT W S +PPP SW + PS
Sbjct: 28 CRSCSPTPSPT---WPSSWPPPSSSSWQLWERPS 58
>AF316573-1|AAM13391.1| 1106|Homo sapiens GLI1 protein.
Length = 1106
Score = 29.9 bits (64), Expect = 8.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 457 PTLCSWRSDYPPPXVQSWSYYPLPSDLFGNPNYL 356
P C ++ YP P ++W +P S L+ P L
Sbjct: 763 PNPCPQQASYPDPTQETWGEFPSHSGLYPGPKAL 796
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 334 RELAEMYKDNSDYQTDRSEADSSSTTVHXEEGNLIARSRASGFKFQP 474
RE+ E +D+ + +D SEA+ S H EE + S AS + P
Sbjct: 347 REVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAP 393
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 334 RELAEMYKDNSDYQTDRSEADSSSTTVHXEEGNLIARSRASGFKFQP 474
RE+ E +D+ + +D SEA+ S H EE + S AS + P
Sbjct: 347 REVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAP 393
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.127 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,756,313
Number of Sequences: 237096
Number of extensions: 1860375
Number of successful extensions: 2964
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2964
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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