Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13k10
         (309 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0793 + 24662506-24663512,24664470-24664787,24664996-246653...    28   1.7  
04_04_1175 + 31482471-31482548,31483780-31483821,31483901-314839...    27   2.3  
10_08_1027 - 22404169-22404807,22406148-22406360,22407062-224072...    27   3.0  
02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,522...    27   3.0  
12_01_0624 - 5137096-5137310,5137923-5138380,5138428-5140070,514...    27   4.0  
01_01_0596 + 4435643-4436664,4437241-4437766                           26   5.2  
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731...    26   6.9  
10_08_0645 - 19562886-19564484                                         25   9.2  

>06_03_0793 + 24662506-24663512,24664470-24664787,24664996-24665323,
            24665465-24665887,24665960-24666252,24666332-24666605,
            24666856-24667358,24667464-24667785,24667875-24668220,
            24668339-24668997,24669524-24669625,24669656-24670052,
            24670155-24670270,24670360-24670386
          Length = 1704

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +1

Query: 34   NANSVRT*DCRIFVLFWV*LSEQQFFFSIGPCTIVAVAIRVSFALRKIKMSILE 195
            N N +R    RI    W  LSE  FF S+G    ++VAI V  +LR++ M  LE
Sbjct: 1052 NVNRIRLVWSRI----WKVLSE--FFVSVGLLENLSVAIFVMDSLRQLAMKFLE 1099


>04_04_1175 +
           31482471-31482548,31483780-31483821,31483901-31483960,
           31484280-31484286,31484783-31484955,31485288-31485364,
           31485854-31485992,31486008-31486163,31486217-31486263,
           31486992-31487052
          Length = 279

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 114 LYRPLYYSGCCYSRFLCVTQNKNVH 188
           +Y  L YS  CYS FLC  ++ + H
Sbjct: 193 IYSNLPYSETCYSAFLCQVEHFSEH 217


>10_08_1027 -
           22404169-22404807,22406148-22406360,22407062-22407255,
           22407422-22407566,22407801-22407875,22408222-22408380,
           22408466-22408645,22408756-22409243,22409375-22409738,
           22409811-22409943,22410023-22410153,22410247-22410354,
           22410451-22410897,22411425-22411514,22411607-22411915,
           22412209-22412320,22412488-22412699
          Length = 1332

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 157 SFALRKIKMSILECLC 204
           S+ LRK KM ++ECLC
Sbjct: 415 SYTLRKSKMLLVECLC 430


>02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,
            5222445-5222793,5223189-5223510,5223621-5224123,
            5224486-5224578,5224708-5224759,5224837-5225129,
            5225208-5225630,5225734-5226070,5226185-5226220,
            5226272-5226589,5227465-5228450
          Length = 1637

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +1

Query: 82   WV*LSEQQFFFSIGPCTIVAVAIRVSFALRKIKMSILE 195
            W  LS+  FF S+G    ++VAI V  +LR++ M  LE
Sbjct: 1029 WKVLSD--FFVSVGSSENLSVAIFVMDSLRQLAMKFLE 1064


>12_01_0624 -
           5137096-5137310,5137923-5138380,5138428-5140070,
           5140245-5140462,5140589-5140757,5141249-5141305
          Length = 919

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 97  EQQFFFSIGPCTIVAVAIRVSFALRKIK 180
           E++ +  +GP TIV   ++  +A+ K+K
Sbjct: 7   ERKIWIEMGPITIVVSTLKYEYAIEKLK 34


>01_01_0596 + 4435643-4436664,4437241-4437766
          Length = 515

 Score = 26.2 bits (55), Expect = 5.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 150 SRFLCVTQNKNVHTRVPMLIT 212
           S+FLCV + KN   R+P  +T
Sbjct: 61  SKFLCVPERKNQTIRLPSTVT 81


>12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,
            7316430-7316625,7316727-7316953,7317177-7318134,
            7320104-7321307,7321517-7321876,7321965-7323195,
            7323334-7323599,7323738-7326335
          Length = 2453

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 233  LNNFILSRY*HRHSSMDIFILRNAKETRIATATIVQ 126
            L  F++SR+ H H S+ +  +  A   R     IVQ
Sbjct: 2373 LAGFVISRWMHTHPSLGLMDVAEASVRRYLNGQIVQ 2408


>10_08_0645 - 19562886-19564484
          Length = 532

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 114 EKKLLFTQLNPKQHKDSTILSPNRISIYKYF 22
           E+ ++FT    K   D  IL P R+ ++ +F
Sbjct: 333 ERVMVFTMSGDKDGVDPAILRPGRLDVHIHF 363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,072,770
Number of Sequences: 37544
Number of extensions: 93473
Number of successful extensions: 177
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)