Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13k10
         (309 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-19|CAB55031.1|  269|Caenorhabditis elegans Hypothetical...    27   3.5  
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p...    25   8.1  

>AL117195-19|CAB55031.1|  269|Caenorhabditis elegans Hypothetical
           protein Y57A10A.26 protein.
          Length = 269

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 150 NSNSHYSTRAYREKKLLFTQLNPKQHKDSTILSPN 46
           N N+ +   + R + + F +LN +QH DSTI+  N
Sbjct: 50  NINNEFKKMSARGQ-IPFIELNGRQHADSTIIIDN 83


>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
           protein C14B9.8 protein.
          Length = 1226

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 145 AIRVSFALRKIKMSILECLC**RDSMKLFKK 237
           A  + F   K+  SILECL    + ++LFKK
Sbjct: 75  AKELGFTCVKMMQSILECLMRQAEKVELFKK 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,029,215
Number of Sequences: 27780
Number of extensions: 104171
Number of successful extensions: 215
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)