Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13k10
         (309 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   4.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   4.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   5.9  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   5.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 42  FCSDLGLSNLCVVLGLT 92
           FC D G   +  VLG T
Sbjct: 77  FCQDSGYDKILQVLGAT 93


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 60  LSNLCVVLGLTE*TAVFFLYRPLYY 134
           ++ LCV + L+    +  LY P  Y
Sbjct: 737 ITTLCVAISLSATVTLVCLYSPKIY 761


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 42  FCSDLGLSNLCVVLGLT 92
           FC D G   +  VLG T
Sbjct: 77  FCQDSGYDKILQVLGAT 93


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 60  LSNLCVVLGLTE*TAVFFLYRPLYY 134
           ++ LCV + L+    +  LY P  Y
Sbjct: 827 ITTLCVAISLSATVTLVCLYSPKIY 851


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 97  HSVKPKTTQRFDNPKSEQN 41
           H +    T++F NP+ E+N
Sbjct: 276 HGLYYVDTEQFSNPQYEEN 294


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 121 GPCTIVAVAIRVSFALRK 174
           GPC ++ V   VSF L +
Sbjct: 222 GPCVLLVVLSWVSFWLNR 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,734
Number of Sequences: 438
Number of extensions: 1454
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)