Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13k01
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 67 2e-12
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.10
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 30 0.32
SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|ch... 29 0.56
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 29 0.56
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 29 0.74
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 29 0.74
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 28 0.97
SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 28 0.97
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 3.0
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 27 3.0
SPBC8E4.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.0
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 3.9
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 26 3.9
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 26 3.9
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 5.2
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 25 6.9
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 25 6.9
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 6.9
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 25 9.1
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 67.3 bits (157), Expect = 2e-12
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Frame = +2
Query: 140 LTKLHKMEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKS 319
L + K + D ++SD + I IS + K ++ +P TN SE+NLI S K+
Sbjct: 235 LNQKRKKDEADAESVLSSDDNDSIEEIS-IKKVKY--DP---HETNKESEYNLIGSSEKT 288
Query: 320 ILKNVSNILSDTASH--VEITKKLLKSQEES---KVLSKPLEKPQVERIKRATGYLETKK 484
I +++++L + ++++ K L S+ S K L PL K +R++R Y +TK
Sbjct: 289 I--DITDLLDSIPMNEQLKVSLKPLVSESSSISSKKLDAPLAKSIQDRLERQAAYEQTKN 346
Query: 485 KVGRWDPIVARSRTVDQVFFPLKKAENRLQPTQAFISKLKTKSELEREL 631
+ +W PIVA +R DQ+ FP+ + + S + ++E ER++
Sbjct: 347 DLEKWKPIVADNRKSDQLIFPMNETARPVPSNNGLASSFEPRTESERKM 395
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.5 bits (68), Expect = 0.10
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = +2
Query: 203 QLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSI---LKNVSNILSDTASHVEI 373
QL++V KLDK + E + + ++I + + SNKS+ + + +L + V
Sbjct: 209 QLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASNKSLRGEQERLEKLLVSSNKTVST 268
Query: 374 TKKLLKS-QEESKVLSKPLEKPQVERIKRATGYLETKKKVGRW-DPIVARSRTVDQVFFP 547
++ S + E K L + LEK + + + E K V + D IV + + ++ +
Sbjct: 269 LRQTENSLRAECKTLQEKLEKCAINE-EDSKLLEELKHNVANYSDAIVHKDKLIEDLSTR 327
Query: 548 LKKAEN 565
+ + +N
Sbjct: 328 ISEFDN 333
Score = 29.5 bits (63), Expect = 0.42
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Frame = +2
Query: 155 KMEGIDDI-EHIASDHDQLISVISKLDKT-------QHIIEPTRNEPTNINSEFNLIKKS 310
+ E I ++ E S + SV SKLD+T + IE +N+ + + E N + S
Sbjct: 953 RQEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLAS 1012
Query: 311 NKSILKNVSNILSDTAS-HVEITKKLLKSQEESKVLS 418
N+ ++ ++ N + AS EI KK ++ + LS
Sbjct: 1013 NERLMDDLKNNGENIASLQTEIEKKRAENDDLQSKLS 1049
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 29.9 bits (64), Expect = 0.32
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 230 DKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESK 409
D H I P + N +S+ + S LKNV +S + +H E + L +EE
Sbjct: 169 DTNNHQIPPPK---PNFSSKAGSSSPISVSPLKNVKAYISQSPTHSEASSVLSSEEEEEN 225
Query: 410 VLSKPLEKPQVE 445
V++ P +
Sbjct: 226 VINSSKSVPSFD 237
>SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 411
Score = 29.1 bits (62), Expect = 0.56
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +2
Query: 266 EPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKV-----LSKPLE 430
E T +++ F I +++L +VSN+ + A + TKK +S +ES + KP+E
Sbjct: 36 EKTKLSTNFE-INLPRRTVLSDVSNVGKNNADEKD-TKKAKRSFDESNLSTNEEADKPVE 93
Query: 431 KPQVERIK 454
V+++K
Sbjct: 94 SKFVKKLK 101
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 29.1 bits (62), Expect = 0.56
Identities = 25/113 (22%), Positives = 53/113 (46%)
Frame = +2
Query: 278 INSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKR 457
+ S NLI K + + N+ +DT H + + LK E+ +L++ L+ ++ +K+
Sbjct: 250 VRSLLNLIDKFIDKLSEQSGNVTADTNEHYDRAMQYLKQLVEN-ILNRSLDN-LIDTLKQ 307
Query: 458 ATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKAENRLQPTQAFISKLKTKSE 616
E +++ W + + + V +V LKK + + +KL+ K +
Sbjct: 308 VQHDAENDEELKDW--LESTRQFVRKVL--LKKGYAKSDASDKEFNKLRDKGD 356
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 28.7 bits (61), Expect = 0.74
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 221 SKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQE 400
S L+K E N +N K + ++ +++ S +++ S +E KKLL +E
Sbjct: 178 SYLEKQSDYSELLDNYKKQLNKASESCKGNYQACIESRSTLITSLESLIEEQKKLLSEEE 237
Query: 401 ES 406
ES
Sbjct: 238 ES 239
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 28.7 bits (61), Expect = 0.74
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 257 TRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKL 385
+++ P N+ S F+ + + KNV N+L+D ++ E K L
Sbjct: 240 SQSRPDNL-SPFSHLSNESSDFFKNVKNVLTDVETYHEFLKLL 281
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 28.3 bits (60), Expect = 0.97
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 482 FLFLNILSLALYAQPVVFLMVYLRPWTLPGFSA 384
F+F+++LS AL + +L Y+ PW + F +
Sbjct: 113 FVFMSVLSSALQKKLAPWLKFYITPWVMGFFDS 145
>SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 28.3 bits (60), Expect = 0.97
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 308 SNKSILKNVSNILSDTASHV---EITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLET 478
S K I K V I++ V ++ + + + K L KP+EKP+ E+I+ AT ++
Sbjct: 140 STKYIQKTVGLIIASVKRKVSFSDVEEDEFEPENTRKKLQKPIEKPKKEKIE-ATPKIDG 198
Query: 479 KKKV 490
K++
Sbjct: 199 GKRL 202
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 26.6 bits (56), Expect = 3.0
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 230 DKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESK 409
+K++ I+P++ E I + NK ++ + LS + + L + +++K
Sbjct: 250 NKSEQTIKPSKQNKQK--EEKKTISQGNKPNSRDEDSELSIDVPLSMLNRSLANNSQKNK 307
Query: 410 --VLSKPLEKPQVERIKRATGYLETKKKVGR 496
+KPL++ + +K K+K GR
Sbjct: 308 KRTPNKPLQESSINSVKEGESNPVVKRKRGR 338
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 26.6 bits (56), Expect = 3.0
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 500 PTDQLSFLFL-NILSLALYAQPVVFLMVY-LRPWTLPGFSAIFS*SLHVKQYHSK 342
PT Q +FL ++ ALY P + L V + WTLP F+ F + H K
Sbjct: 792 PTSQTYRVFLLEVIINALYYNPSMSLGVLEMHQWTLPFFALWFENIPSFTRVHDK 846
>SPBC8E4.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 129
Score = 26.6 bits (56), Expect = 3.0
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = -1
Query: 615 SDLVFNFEMKACVGCNLFSAFFKGKKTWSTVRLRATMGSHRPTFFFVSKYPVARFIRSTC 436
+ L+ F + AC+ + + ++ G T+ T RL HR + K P + I+
Sbjct: 40 NQLIRVFCVWACIELHSINPWYSGMYTFETGRLLVLKQRHRVLSMELKK-PNSSTIKPCF 98
Query: 435 GFSNGLLKTLDSSWLFSNFFV 373
++N +L ++F+NF +
Sbjct: 99 TWANSVLYNDILIFIFANFIL 119
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 278 INSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEK 433
I + N ++K+ L+N +N L DT + + + L Q+E K L +EK
Sbjct: 106 IEDQNNSLEKTEFIALQN-ANSLQDTQAKLRLDPLLAIKQQEQKQLQTLMEK 156
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 26.2 bits (55), Expect = 3.9
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +2
Query: 317 SILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGR 496
S L +S S +TKK S +ESK + E + E ++ + +K R
Sbjct: 505 SRLSELSKTFSPEIREPSLTKKTAVSMQESKEEGRSDESSESEESGSSSDESDNSEKEDR 564
Query: 497 WDPIVARSR 523
+PI R
Sbjct: 565 SNPIPVEKR 573
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 323 LKNVSNILSDTASHVEITKKLLKSQEES 406
L VS+ SDTASHV T+K ++E+
Sbjct: 6 LSVVSSTASDTASHVSDTRKRQYQRDEA 33
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 5.2
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 197 HDQLISVISKLDKTQHIIEPTRNEPTNINSEF-NLIKKSNKSILKNVSNILSDTASHVEI 373
H QL+S+IS+ + PT E + +E NL K + + +L+ T V
Sbjct: 1058 HTQLVSLISRARDPDYYSRPTIEEAKTVLAESENLTNKPEEYTV--AQKLLTQTYEWVRR 1115
Query: 374 TKKLL-KSQEESKVLSKPLE 430
K+L K+ ++ ++ LE
Sbjct: 1116 GKRLFGKANAPLEIFNQHLE 1135
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.4 bits (53), Expect = 6.9
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Frame = +2
Query: 248 IEPTRNEPTNINSEFNLI-KKSNKSILKNVSNILSDTASHVE--------ITKKLLKSQE 400
+E PTN+ +E ++ ++++ SI N + H I +K + +E
Sbjct: 561 VESKSVPPTNMATERGVVGRRASMSIAVNARRVSKPEKEHTNPNAEQGDVIPEKPMSIKE 620
Query: 401 ESKVL--SKPLEKPQVERIKRATGYLETKK 484
+L EKP+VE R T +TKK
Sbjct: 621 RMNMLMTKTDYEKPKVEGYGRYTDVQQTKK 650
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 149 LHKMEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEP-TNINSEF--NLIKKSNKS 319
L G+D I+H + + ++++ VIS + P + P T + F + ++ SN +
Sbjct: 212 LTDQRGLDTIKHKSIEQNEILHVISDTLSSPRRRNPLLSSPKTPLRRSFSKSKVRNSNST 271
Query: 320 ILKNVSNILS 349
+N +++S
Sbjct: 272 KRRNFISLIS 281
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.4 bits (53), Expect = 6.9
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +2
Query: 197 HDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEIT 376
H + I +S ++ ++P+N ++ + KS+ +S+ + +H +
Sbjct: 269 HSESIKGLSSSEQGTVYSLKASHDPSN-QTQLSSPNKSSSPTSIEISDFSKNNENHDQSE 327
Query: 377 KKLLKSQEESKVLSKPLEKPQ 439
K +EE +L++P+E PQ
Sbjct: 328 NK---EEEEDMMLTRPIEIPQ 345
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 25.0 bits (52), Expect = 9.1
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +2
Query: 146 KLHKMEGIDDIEHIASDHDQ---LISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNK 316
KL + ++ + SD Q L ++ + + ++E + + N+E + + K
Sbjct: 967 KLAQERELEQTRVLISDQSQDGELKELLEEKENALIMMEEEMRQVNDANTELLRVNATLK 1026
Query: 317 SILKNVSNILSDTASHVEITKKLLKS-QEESKVLS 418
S LKN I+ + S ++ +++ S + +K+L+
Sbjct: 1027 SQLKNYDMIIVEQTSQLKEKNRIIASLTKATKILN 1061
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,492,672
Number of Sequences: 5004
Number of extensions: 50864
Number of successful extensions: 197
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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