Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13k01
(633 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069576-1|AAL39721.1| 771|Drosophila melanogaster LD31322p pro... 96 3e-20
AE014296-2539|AAF49613.2| 771|Drosophila melanogaster CG12301-P... 96 3e-20
AE014134-137|AAF51470.2| 269|Drosophila melanogaster CG2826-PA ... 35 0.080
AY051965-1|AAK93389.1| 974|Drosophila melanogaster LD43161p pro... 34 0.14
AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE... 34 0.14
AY069518-1|AAL39663.1| 817|Drosophila melanogaster LD23718p pro... 33 0.42
AE014298-2316|AAF48557.1| 817|Drosophila melanogaster CG8939-PA... 33 0.42
AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin su... 32 0.56
AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p pro... 32 0.56
AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-P... 32 0.56
AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4 ... 31 1.3
BT012498-1|AAS93769.1| 400|Drosophila melanogaster GM10157p pro... 31 1.7
L26083-1|AAC37187.1| 706|Drosophila melanogaster semaphorin-II ... 29 4.0
BT011447-1|AAR99105.1| 697|Drosophila melanogaster RE45189p pro... 29 4.0
AY128437-1|AAM75030.1| 724|Drosophila melanogaster LD09306p pro... 29 4.0
AY119114-1|AAM50974.1| 699|Drosophila melanogaster RE15216p pro... 29 4.0
AY095026-1|AAM11354.1| 724|Drosophila melanogaster LD09561p pro... 29 4.0
AE014296-3763|AAS64918.1| 699|Drosophila melanogaster CG33217-P... 29 4.0
AE013599-2294|AAS64837.1| 701|Drosophila melanogaster CG4700-PD... 29 4.0
AE013599-2293|AAF57990.1| 724|Drosophila melanogaster CG4700-PB... 29 4.0
AE013599-2292|AAF57989.1| 724|Drosophila melanogaster CG4700-PA... 29 4.0
AE013599-2291|AAM68500.1| 697|Drosophila melanogaster CG4700-PC... 29 4.0
AY047502-1|AAK77234.1| 515|Drosophila melanogaster GH01188p pro... 29 6.9
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 29 6.9
AE014297-3863|AAF56518.1| 515|Drosophila melanogaster CG5886-PA... 29 6.9
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 29 6.9
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 29 6.9
>AY069576-1|AAL39721.1| 771|Drosophila melanogaster LD31322p
protein.
Length = 771
Score = 96.3 bits (229), Expect = 3e-20
Identities = 63/166 (37%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Frame = +2
Query: 170 DDIEHIASD-HDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSI-------- 322
DD EH H +L+ I L K QHI + TR+E ++ EF L+K + +
Sbjct: 3 DDEEHYEPKAHKKLLQAIGSLGKVQHIQKSTRDERQSLQDEFQLVKGVSSAETDHAPRAV 62
Query: 323 -LKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGRW 499
L ++ +IL + H + KKL KVL KPLEKP +RIKR GY KK+GRW
Sbjct: 63 GLNDLVDILRTSTKHSQTGKKLKNIHGSKKVLQKPLEKPAADRIKRTIGYEGVTKKLGRW 122
Query: 500 DPIVARSRTVDQVFFPLKKAENRLQPTQAFISKLKT--KSELEREL 631
D +VA+ R+ + FPL +E T A L T KS L +EL
Sbjct: 123 DAVVAQQRSAETQIFPL-PSETVYVNTAANARPLNTRVKSNLAQEL 167
>AE014296-2539|AAF49613.2| 771|Drosophila melanogaster CG12301-PA
protein.
Length = 771
Score = 96.3 bits (229), Expect = 3e-20
Identities = 63/166 (37%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Frame = +2
Query: 170 DDIEHIASD-HDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSI-------- 322
DD EH H +L+ I L K QHI + TR+E ++ EF L+K + +
Sbjct: 3 DDEEHYEPKAHKKLLQAIGSLGKVQHIQKSTRDERQSLQDEFQLVKGVSSAETDHAPRAV 62
Query: 323 -LKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGRW 499
L ++ +IL + H + KKL KVL KPLEKP +RIKR GY KK+GRW
Sbjct: 63 GLNDLVDILRTSTKHSQTGKKLKNIHGSKKVLQKPLEKPAADRIKRTIGYEGVTKKLGRW 122
Query: 500 DPIVARSRTVDQVFFPLKKAENRLQPTQAFISKLKT--KSELEREL 631
D +VA+ R+ + FPL +E T A L T KS L +EL
Sbjct: 123 DAVVAQQRSAETQIFPL-PSETVYVNTAANARPLNTRVKSNLAQEL 167
>AE014134-137|AAF51470.2| 269|Drosophila melanogaster CG2826-PA
protein.
Length = 269
Score = 35.1 bits (77), Expect = 0.080
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 275 NINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLK-SQEESKVLSKPLEKPQVERI 451
N+++EFN + K++ KN+ L+ ++ TKK L S E KV+ K Q ++I
Sbjct: 90 NVDNEFNALSAKIKNV-KNIQRHLASLELQLQETKKALNLSVEAKKVMPKTEIPSQFQKI 148
Query: 452 KRATGYLETKKKV 490
++E K KV
Sbjct: 149 GWRHFFIEKKHKV 161
>AY051965-1|AAK93389.1| 974|Drosophila melanogaster LD43161p
protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 170 DDIEHIASDHDQL-ISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSN--KSILKNVSN 340
D + H+AS + Q ++I K+D + P + +P N + I +N S+L + S+
Sbjct: 68 DSVSHLASKYPQSEYNLIQKIDSNSTLTAPAQYQPQNFYANTGTISSTNGYGSLLCHASS 127
Query: 341 ILSDTASHVEITKKLLKSQEESKVLSKPLEK 433
S A V KLL ++ L + L+K
Sbjct: 128 TTSPLA--VRKRDKLLHRFSDAATLGRKLKK 156
>AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE,
isoform E protein.
Length = 1167
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 170 DDIEHIASDHDQL-ISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSN--KSILKNVSN 340
D + H+AS + Q ++I K+D + P + +P N + I +N S+L + S+
Sbjct: 261 DSVSHLASKYPQSEYNLIQKIDSNSTLTAPAQYQPQNFYANTGTISSTNGYGSLLCHASS 320
Query: 341 ILSDTASHVEITKKLLKSQEESKVLSKPLEK 433
S A V KLL ++ L + L+K
Sbjct: 321 TTSPLA--VRKRDKLLHRFSDAATLGRKLKK 349
>AY069518-1|AAL39663.1| 817|Drosophila melanogaster LD23718p
protein.
Length = 817
Score = 32.7 bits (71), Expect = 0.42
Identities = 24/112 (21%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = +2
Query: 197 HDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA-SHVEI 373
+D+ + V KLD+ +H+ +PT P + +E+ +K + ++ + ++ A H
Sbjct: 661 NDENVPVWFKLDEDEHMTKPT-PVPKELTAEYQ--RKLQEVNVRPIKKVMEAKARKHRRA 717
Query: 374 TKKLLKSQEESKVLSKPLEKPQVERIKRATG-YLETKKKVGRWDPIVARSRT 526
TK+L K+++ ++ + + + E+ K+ Y + ++K +VA+ +T
Sbjct: 718 TKRLAKAKKMAEKIMENSDATNHEKSKQLKKVYKKAQEKKKEVTYVVAKKQT 769
>AE014298-2316|AAF48557.1| 817|Drosophila melanogaster CG8939-PA
protein.
Length = 817
Score = 32.7 bits (71), Expect = 0.42
Identities = 24/112 (21%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = +2
Query: 197 HDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA-SHVEI 373
+D+ + V KLD+ +H+ +PT P + +E+ +K + ++ + ++ A H
Sbjct: 661 NDENVPVWFKLDEDEHMTKPT-PVPKELTAEYQ--RKLQEVNVRPIKKVMEAKARKHRRA 717
Query: 374 TKKLLKSQEESKVLSKPLEKPQVERIKRATG-YLETKKKVGRWDPIVARSRT 526
TK+L K+++ ++ + + + E+ K+ Y + ++K +VA+ +T
Sbjct: 718 TKRLAKAKKMAEKIMENSDATNHEKSKQLKKVYKKAQEKKKEVTYVVAKKQT 769
>AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin
subunit SMC4 protein.
Length = 1409
Score = 32.3 bits (70), Expect = 0.56
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +2
Query: 203 QLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKK 382
+L++V S + Q +E T + ++ I+K+ K L+++ + +E K
Sbjct: 394 RLVTVESAYTEIQSTMENTNKQRKKDKAQ---IEKNEKE-LEDLHKLPEKNQREIEDCNK 449
Query: 383 LLKSQEESKV-LSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKA 559
L+S E SKV L++ LEK Q E + + T L T+K++ D +V V+ ++
Sbjct: 450 KLESLEVSKVTLNEELEKQQAE-LTKTTAPL-TEKRLKLSDELVGLKEKVNTAKGEVQVF 507
Query: 560 ENRLQ 574
E++L+
Sbjct: 508 ESQLK 512
>AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p
protein.
Length = 1012
Score = 32.3 bits (70), Expect = 0.56
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +2
Query: 203 QLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKK 382
+L++V S + Q +E T + ++ I+K+ K L+++ + +E K
Sbjct: 394 RLVTVESAYTEIQSTMENTNKQRKKDKAQ---IEKNEKE-LEDLHKLPEKNQREIEDCNK 449
Query: 383 LLKSQEESKV-LSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKA 559
L+S E SKV L++ LEK Q E + + T L T+K++ D +V V+ ++
Sbjct: 450 KLESLEVSKVTLNEELEKQQAE-LTKTTAPL-TEKRLKLSDELVGLKEKVNTAKGEVQVF 507
Query: 560 ENRLQ 574
E++L+
Sbjct: 508 ESQLK 512
>AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-PA
protein.
Length = 1409
Score = 32.3 bits (70), Expect = 0.56
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +2
Query: 203 QLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKK 382
+L++V S + Q +E T + ++ I+K+ K L+++ + +E K
Sbjct: 394 RLVTVESAYTEIQSTMENTNKQRKKDKAQ---IEKNEKE-LEDLHKLPEKNQREIEDCNK 449
Query: 383 LLKSQEESKV-LSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKA 559
L+S E SKV L++ LEK Q E + + T L T+K++ D +V V+ ++
Sbjct: 450 KLESLEVSKVTLNEELEKQQAE-LTKTTAPL-TEKRLKLSDELVGLKEKVNTAKGEVQVF 507
Query: 560 ENRLQ 574
E++L+
Sbjct: 508 ESQLK 512
>AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4
homolog Gluon protein.
Length = 1409
Score = 31.1 bits (67), Expect = 1.3
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +2
Query: 203 QLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKK 382
+L++V S + Q +E T + ++ I+K+ K L+++ + +E K
Sbjct: 394 RLVTVESAYTEIQSTMENTNKQRKKDKAQ---IEKNEKE-LEDLHKLPEKNQREIEDCNK 449
Query: 383 LLKSQEESKV-LSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKA 559
L+S E +KV L++ LEK Q E + + T L T+K++ D +V V+ ++
Sbjct: 450 KLESLEVNKVTLNEELEKQQAE-LTKTTAPL-TEKRLKLSDELVGLKEKVNTAKGEVQVF 507
Query: 560 ENRLQ 574
E++L+
Sbjct: 508 ESQLK 512
>BT012498-1|AAS93769.1| 400|Drosophila melanogaster GM10157p
protein.
Length = 400
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +2
Query: 152 HKMEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKN 331
H+M+ DD +H S + I ++ L K P+ P ++ + N I N KN
Sbjct: 53 HEMQQ-DDFKHYKSPAE--IKHLATLSKMYFACTPSNQVPVDLTTYLNNITFENVKESKN 109
Query: 332 VSNILSDTASHVEITKKLL 388
+ + S A H + K+L
Sbjct: 110 ILSFCSILADHNDYCAKML 128
>L26083-1|AAC37187.1| 706|Drosophila melanogaster semaphorin-II
protein.
Length = 706
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 526 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 585
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 586 TWYHHSKDK-GRYE 598
>BT011447-1|AAR99105.1| 697|Drosophila melanogaster RE45189p
protein.
Length = 697
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 517 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 576
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 577 TWYHHSKDK-GRYE 589
>AY128437-1|AAM75030.1| 724|Drosophila melanogaster LD09306p
protein.
Length = 724
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 544 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 603
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 604 TWYHHSKDK-GRYE 616
>AY119114-1|AAM50974.1| 699|Drosophila melanogaster RE15216p
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 149 LHKMEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEP-TNINSEF 292
LHK+ GI D EH+ + + +S L Q+II T P ++NS F
Sbjct: 156 LHKIHGISDKEHMDNKTEWKDFQLSLLSNIQYIINRTIVMPDESVNSPF 204
>AY095026-1|AAM11354.1| 724|Drosophila melanogaster LD09561p
protein.
Length = 724
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 544 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 603
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 604 TWYHHSKDK-GRYE 616
>AE014296-3763|AAS64918.1| 699|Drosophila melanogaster CG33217-PA
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 149 LHKMEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEP-TNINSEF 292
LHK+ GI D EH+ + + +S L Q+II T P ++NS F
Sbjct: 156 LHKIHGISDKEHMDNKTEWKDFQLSLLSNIQYIINRTIVMPDESVNSPF 204
>AE013599-2294|AAS64837.1| 701|Drosophila melanogaster CG4700-PD,
isoform D protein.
Length = 701
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 521 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 580
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 581 TWYHHSKDK-GRYE 593
>AE013599-2293|AAF57990.1| 724|Drosophila melanogaster CG4700-PB,
isoform B protein.
Length = 724
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 544 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 603
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 604 TWYHHSKDK-GRYE 616
>AE013599-2292|AAF57989.1| 724|Drosophila melanogaster CG4700-PA,
isoform A protein.
Length = 724
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 544 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 603
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 604 TWYHHSKDK-GRYE 616
>AE013599-2291|AAM68500.1| 697|Drosophila melanogaster CG4700-PC,
isoform C protein.
Length = 697
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 281 NSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRA 460
+ E N + +L++V+N SD + KK++ + +S L ++ P+V + ++
Sbjct: 517 DKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQV 576
Query: 461 TGYLETKKKVGRWD 502
T Y +K K GR++
Sbjct: 577 TWYHHSKDK-GRYE 589
>AY047502-1|AAK77234.1| 515|Drosophila melanogaster GH01188p
protein.
Length = 515
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +2
Query: 170 DDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILS 349
D ++ + + ++I + Q +E R + + + +L KS+ KN +
Sbjct: 89 DKLQEVCREQQRIIKSVKNESLLQIKVEEERRKESQTKFQSSL-NDVQKSLAKNNEENIK 147
Query: 350 DTASHVEITKKLLKSQEESKVLSKPLEK 433
++E+TKKL E+ + + LEK
Sbjct: 148 LRDYNIEMTKKLKLLAEQYQTREQHLEK 175
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 191 SDHDQLISVISKLDKTQHIIEPTRNEPTNI--NSEFNLIKKSNKSILKNVSNILSDTASH 364
S +++ ++ + D T+ I + P + +S+FN I K N+S V+ + S
Sbjct: 2293 SVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRILKKNRSKNDEVAELGEQKQSQ 2352
Query: 365 VEITKKLLKSQ--EESKVLSKPLEKPQVERIK 454
+E K+LLK + +L + L+ E +K
Sbjct: 2353 LERHKELLKKNILRKRSLLERNLQSEIHEDVK 2384
>AE014297-3863|AAF56518.1| 515|Drosophila melanogaster CG5886-PA
protein.
Length = 515
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +2
Query: 170 DDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILS 349
D ++ + + ++I + Q +E R + + + +L KS+ KN +
Sbjct: 89 DKLQEVCREQQRIIKSVKNESLLQIKVEEERRKESQTKFQSSL-NDVQKSLAKNNEENIK 147
Query: 350 DTASHVEITKKLLKSQEESKVLSKPLEK 433
++E+TKKL E+ + + LEK
Sbjct: 148 LRDYNIEMTKKLKLLAEQYQTREQHLEK 175
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 191 SDHDQLISVISKLDKTQHIIEPTRNEPTNI--NSEFNLIKKSNKSILKNVSNILSDTASH 364
S +++ ++ + D T+ I + P + +S+FN I K N+S V+ + S
Sbjct: 2293 SVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRILKKNRSKNDEVAELGEQKQSQ 2352
Query: 365 VEITKKLLKSQ--EESKVLSKPLEKPQVERIK 454
+E K+LLK + +L + L+ E +K
Sbjct: 2353 LERHKELLKKNILRKRSLLERNLQSEIHEDVK 2384
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 191 SDHDQLISVISKLDKTQHIIEPTRNEPTNI--NSEFNLIKKSNKSILKNVSNILSDTASH 364
S +++ ++ + D T+ I + P + +S+FN I K N+S V+ + S
Sbjct: 2273 SVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRILKKNRSKNDEVAELGEQKQSQ 2332
Query: 365 VEITKKLLKSQ--EESKVLSKPLEKPQVERIK 454
+E K+LLK + +L + L+ E +K
Sbjct: 2333 LERHKELLKKNILRKRSLLERNLQSEIHEDVK 2364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,288,553
Number of Sequences: 53049
Number of extensions: 491779
Number of successful extensions: 1404
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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