Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13k01
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 34 0.097
AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical... 33 0.17
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.39
AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical ... 32 0.39
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 32 0.39
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 32 0.39
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 31 0.69
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 31 0.69
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 31 0.91
AC006608-9|AAF39760.1| 166|Caenorhabditis elegans Hypothetical ... 31 0.91
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 30 1.2
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical p... 29 2.1
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical pr... 29 2.1
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 2.8
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 3.7
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 29 3.7
Z49886-3|CAA90052.1| 364|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81556-3|CAB04521.2| 364|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z75554-7|CAA99960.1| 297|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 6.4
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81136-2|CAB03459.1| 743|Caenorhabditis elegans Hypothetical pr... 27 8.4
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 33.9 bits (74), Expect = 0.097
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 221 SKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQE 400
+K D T + T + P+ ++ +L +S K S+ + TKK LKS
Sbjct: 36 TKTDATSLLSHLTVSRPSTNKAKQSLGIGGLESTEKTGKKRKSEATADETTTKKKLKS-- 93
Query: 401 ESKVLSKPLEKPQVER-IKRATGYLETKKKVGR-WDPIVARSRTVDQVFFPLKKAE 562
K L PL+ + + I+ + + KK+V + W +V +R DQ+ FPL K +
Sbjct: 94 --KTLI-PLKDVEARKEIEGKIAFTDLKKEVTQNWTELVQSNRVSDQLIFPLTKPD 146
>AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical
protein Y111B2A.5a protein.
Length = 434
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Frame = +2
Query: 170 DDIEHIASDHDQLISVISKLDKTQHIIEPTR----NEPTNINS--EFNLIKKS--NKSIL 325
+++ H+ L S +S +++ ++ + NE T + E +L + ++ +L
Sbjct: 236 NEVSHLKRYIADLQSKLSTMEEELKVLREQKLDENNEATQVRQMLERDLFEAEEVDRGLL 295
Query: 326 KNVSNILSDTASHVEITKKLLK-SQEESKVLSKPLEKPQVERI 451
+ + N + + +E K LK ++EES L K LEK + ERI
Sbjct: 296 EGIENRVKEMEDQLEAKVKALKEAKEESSKLEKKLEKAEKERI 338
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 31.9 bits (69), Expect = 0.39
Identities = 22/95 (23%), Positives = 49/95 (51%)
Frame = +2
Query: 170 DDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILS 349
++I+ +D D L +++ L +H I+ + ++ E LI+K K + L
Sbjct: 338 EEIKESRADVDNLRKIVNDL---KHEIKMSESQMRRKKVEIMLIRKEIAKAQKQLREALG 394
Query: 350 DTASHVEITKKLLKSQEESKVLSKPLEKPQVERIK 454
H E+TKKL +++++ + L+ +E+ + ++K
Sbjct: 395 KFG-HEELTKKLAEAEDKRESLNIEIEEIEHVQLK 428
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 230 DKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESK 409
+K Q E +NSE N++ + K + ++ +L+ + E+T+KL +S++E+
Sbjct: 109 EKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETS 168
Query: 410 VLSKPLE 430
LE
Sbjct: 169 TAKTELE 175
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 230 DKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESK 409
+K Q E +NSE N++ + K + ++ +L+ + E+T+KL +S++E+
Sbjct: 109 EKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETS 168
Query: 410 VLSKPLE 430
LE
Sbjct: 169 TAKTELE 175
>AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical
protein H28O16.2 protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.39
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 185 IASDHDQLISVISKLDKTQHIIEPTRNEPTNINS--EFNLIKKSNKSILKNVSNILSDTA 358
+A D++I ++ + + IE T E T +F I++ N+ I ++
Sbjct: 1 MADKLDEIIDKVASGQRKKDTIEDTEEEGTRKRKIEQFEDIERPNELSGFKKQKIEENSE 60
Query: 359 SHVEITKKLLKSQEESKVLSKPLEKPQVERIK 454
H E T++ +++Q V+ KP E+P+++R K
Sbjct: 61 IHAEETEESVEAQ---MVMKKPSEEPELKRRK 89
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.39
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = +2
Query: 158 MEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNV- 334
ME +++ S+H++L S + K++K +I N + + L++ +NK + ++
Sbjct: 412 MENEAELKKARSEHEKLRSKLEKIEKK--LIVGGENLLEKVEEQAKLLEVNNKELEQSKF 469
Query: 335 ------SNILSDTASHVEITKKLLKSQEESKVLSKPLEK 433
+ + TA VEI ++ QEE+ V SK ++K
Sbjct: 470 QEAHLRTQLEERTAVKVEIEERYSSLQEEAFVKSKKIKK 508
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 31.9 bits (69), Expect = 0.39
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Frame = +2
Query: 158 MEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNV- 334
ME +++ S+H++L S + K++K +I N + + L++ +NK + ++
Sbjct: 414 MENEAELKKARSEHEKLRSKLEKIEKK--LIVGGENLLEKVEEQAKLLEVNNKELEQSKF 471
Query: 335 ------SNILSDTASHVEITKKLLKSQEESKVLSKPLEK 433
+ + TA VEI ++ QEE+ V SK ++K
Sbjct: 472 QEAHLRTQLEERTAVKVEIEERYSSLQEEAFVKSKKIKK 510
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 31.1 bits (67), Expect = 0.69
Identities = 25/104 (24%), Positives = 43/104 (41%)
Frame = +2
Query: 179 EHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA 358
EH+ DH S+ + Q++I T P N+ L+ ++S+ N+ S+
Sbjct: 772 EHVGCDHCSKSSLNHSIPSLQNVI--TSTSPYTDNAVI-LVSSKDRSL--NILGFRSNNM 826
Query: 359 SHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV 490
++ +E+ K +PL VE + LE KKV
Sbjct: 827 GFANFPYNVVMLKEDLKGSEEPLTDLTVESLVEKVETLEVTKKV 870
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 31.1 bits (67), Expect = 0.69
Identities = 25/104 (24%), Positives = 43/104 (41%)
Frame = +2
Query: 179 EHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTA 358
EH+ DH S+ + Q++I T P N+ L+ ++S+ N+ S+
Sbjct: 772 EHVGCDHCSKSSLNHSIPSLQNVI--TSTSPYTDNAVI-LVSSKDRSL--NILGFRSNNM 826
Query: 359 SHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV 490
++ +E+ K +PL VE + LE KKV
Sbjct: 827 GFANFPYNVVMLKEDLKGSEEPLTDLTVESLVEKVETLEVTKKV 870
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 30.7 bits (66), Expect = 0.91
Identities = 27/112 (24%), Positives = 46/112 (41%)
Frame = +2
Query: 227 LDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEES 406
L Q +E + N E +KKS S + + T ++ KKL K Q+E
Sbjct: 227 LKDNQEGLEKIAKDVKNKEGEIEELKKSVSSEIVKATEAAHATD---QLRKKLQKQQDEH 283
Query: 407 KVLSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKAE 562
+ + K ++E +K G L +K++ D + + T + LK E
Sbjct: 284 EKRVEQEHKKEIEDLK---GALAAEKRISEADKVELKKLTEELQSMHLKNKE 332
>AC006608-9|AAF39760.1| 166|Caenorhabditis elegans Hypothetical
protein C15F1.8 protein.
Length = 166
Score = 30.7 bits (66), Expect = 0.91
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 239 QHIIEPTRNEPTNINSEFNLIKKSNKSI---LKNVSNILSDTASHVEITKKLLKSQEESK 409
Q IE T+ + + FN+ KK+N +I K + + T HVE ++L K +++ K
Sbjct: 81 QFEIEDTKKKISAAILNFNISKKANNAIRSERKRIVATILKTRKHVERFRRLWKKEKKKK 140
Query: 410 VLSKPLEK 433
S+ L K
Sbjct: 141 EHSEILYK 148
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 251 EPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEES 406
EP + ++ + + KS K +S I+SD+ H+EI +K +S + +
Sbjct: 582 EPVVSNALDVIQKIKNVSKSTLDSAKTISKIVSDSRQHLEILQKSGQSMKSA 633
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 500 PTDQLSFLFLNILSLALYAQPVVFLMV 420
P D SF FLN + +Y P+ FL V
Sbjct: 1476 PLDLASFPFLNTFDIQIYGTPIAFLQV 1502
>Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical
protein K08E3.5f protein.
Length = 493
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 260 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 439
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 119 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 178
Query: 440 VERIKRAT 463
RI R T
Sbjct: 179 YPRINRET 186
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 260 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 439
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 122 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 181
Query: 440 VERIKRAT 463
RI R T
Sbjct: 182 YPRINRET 189
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 260 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 439
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 123 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 182
Query: 440 VERIKRAT 463
RI R T
Sbjct: 183 YPRINRET 190
>Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical
protein K08E3.5c protein.
Length = 511
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 260 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 439
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 137 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 196
Query: 440 VERIKRAT 463
RI R T
Sbjct: 197 YPRINRET 204
>Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical
protein K08E3.5b protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 260 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 439
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 148 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 207
Query: 440 VERIKRAT 463
RI R T
Sbjct: 208 YPRINRET 215
>Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical
protein K08E3.5a protein.
Length = 509
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 260 RNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQ 439
RN+ T ++ I+ NK+ +V +L ++ + E T+K+LK KV + Q
Sbjct: 135 RNDLTFLDLTMQQIQTLNKTYGVDVPLVLMNSFNTNEDTQKVLKKYANVKVSVHTFSQSQ 194
Query: 440 VERIKRAT 463
RI R T
Sbjct: 195 YPRINRET 202
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 314 KSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV- 490
K+++KN L T S +I ++ + +E++ + K LEK +R+K E +++
Sbjct: 482 KNLMKNEIESLRQTFSDAKI--RIRELEEDANIFRKDLEKADDDRLKLDAALKEANEEID 539
Query: 491 GRWDPIVARSRTVDQV 538
+ IVA T +++
Sbjct: 540 SKAAEIVASLNTANRL 555
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 314 KSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKV- 490
K+++KN L T S +I ++ + +E++ + K LEK +R+K E +++
Sbjct: 482 KNLMKNEIESLRQTFSDAKI--RIRELEEDANIFRKDLEKADDDRLKLDAALKEANEEID 539
Query: 491 GRWDPIVARSRTVDQV 538
+ IVA T +++
Sbjct: 540 SKAAEIVASLNTANRL 555
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 3.7
Identities = 27/147 (18%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Frame = +2
Query: 203 QLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKK 382
+L IS D + ++ +E N ++ + + N+ I D +E+T +
Sbjct: 1509 ELQDSISNKDDFGKNVHELEKAKRSLEAELNDMRVQMEELEDNLQ-IAEDARLRLEVTNQ 1567
Query: 383 LLKSQEESKVLSKPLEKPQ-----VERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFP 547
LKS+ + + +K +E + +++I+ LE +K+ G+ + R + +Q+
Sbjct: 1568 ALKSESDRAISNKDVEAEEKRRGLLKQIRDLENELENEKR-GKSGAVSHRKKIENQIGEL 1626
Query: 548 LKKAENRLQPTQAFISKLKTKSELERE 628
++ E + + + +LK ++ +E
Sbjct: 1627 EQQLEVANRLKEEYNKQLKKNQQIIKE 1653
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 296 LIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPL 427
++ S KS +++ S SDT V +KLLK +S V S+P+
Sbjct: 380 ILNISTKSHVESPSTSSSDTVHTVSDLQKLLKKSSKSVVKSEPV 423
>Z49886-3|CAA90052.1| 364|Caenorhabditis elegans Hypothetical
protein C06A1.3 protein.
Length = 364
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -3
Query: 589 EGLRWLQSIFCFFQRKENLVHCSTASNNGVPPTNFLFCF*ISCRSLYTLNLWF 431
+G+ L +FC R + ++ N+ P N ++ F + C+ Y + LW+
Sbjct: 128 QGIEVLILLFCLKIRYRDRIYL-LRGNHETPSVNKIYGFYVECQYKYGIGLWW 179
>Z81556-3|CAB04521.2| 364|Caenorhabditis elegans Hypothetical
protein F58G1.3 protein.
Length = 364
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -3
Query: 589 EGLRWLQSIFCFFQRKENLVHCSTASNNGVPPTNFLFCF*ISCRSLYTLNLWF 431
+G+ L +FC R + ++ N+ P N ++ F + C+ Y + LW+
Sbjct: 128 QGIEVLILLFCLKIRYRDRIYL-LRGNHETPSVNKIYGFYVECQYKYGVGLWW 179
>Z75554-7|CAA99960.1| 297|Caenorhabditis elegans Hypothetical
protein ZC455.9 protein.
Length = 297
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 301 YQIKF*IDVCGLVACGLYYM 242
YQI+F +D+C +A +YY+
Sbjct: 48 YQIRFFVDICYSIAVSIYYV 67
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 27.9 bits (59), Expect = 6.4
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Frame = +2
Query: 158 MEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVS 337
+E D + ++L SVI L +Q IE ++ + +NS IK+ SI +
Sbjct: 1123 VENADQAAKHKEEQERLQSVIDTLRTSQSTIEESQAKSEELNSR---IKELQASI-EFAQ 1178
Query: 338 NILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGRW-DPIVA 514
L+DT + K K +E KV + L Q +++A+ LE + + + A
Sbjct: 1179 KALADTEN-----AKQEKVEELEKVQEQMLNLVQAFEVEKASIRLEWNSSLSNANEKLEA 1233
Query: 515 RSRTVDQVFFPLKKAENRLQP-TQAFISKLK 604
+ Q + E+R++ +Q F ++L+
Sbjct: 1234 AEEALSQKENTIVTLESRIETISQQFEARLE 1264
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 245 IIEPTRNEPTNINSEFNLIKKSNKSILKNVSNI 343
I+E R E I++ FN + NKS+++++ +
Sbjct: 18 IVETMRTESAAISNNFNAVNSVNKSVVQHLDEL 50
>Z81136-2|CAB03459.1| 743|Caenorhabditis elegans Hypothetical
protein W02B8.3 protein.
Length = 743
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 377 KKLLK-SQEESKVLSKPLEKPQVERIKR----ATGYLETKKKVGRWDPIVARSRTVDQVF 541
K+ +K Q +S VL +K RI + + + K +V +W I+AR R
Sbjct: 195 KRSIKVKQADSYVLKSDYDKSPFSRITKNLQESVRIFKNKDRVSKWQDIIARIRDESFRL 254
Query: 542 FPLKKAEN 565
K+AEN
Sbjct: 255 KTRKQAEN 262
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +2
Query: 278 INSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKS-------QEESKVLSKPLEKP 436
+N ++ ++ L NVSN + A I ++LKS Q K+++ ++K
Sbjct: 219 VNKPSHIANLKSQLTLVNVSNFSNPPAYGARIVHEILKSPKYREQWQNSIKMMAFRIKKT 278
Query: 437 QVERIKRATGYLETKKKVGRWDPIVARS 520
+ E I R L+T G+WD I +S
Sbjct: 279 RQELI-RELNMLQTS---GKWDRITQQS 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,659,643
Number of Sequences: 27780
Number of extensions: 280491
Number of successful extensions: 891
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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