Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13j22
         (202 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              24   0.20 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   3.2  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    19   4.3  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    19   4.3  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           19   7.4  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 0.20
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = +3

Query: 90  YCCCVILKAINILD----FK*KNIDHIIEIIV 173
           YC C ILK  NILD    FK + I  ++E+++
Sbjct: 62  YCEC-ILKNFNILDKNNVFKPQGIKAVMELLI 92


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 136 LKSKIFIAFNMTQQQ 92
           L S+  +AF MT+QQ
Sbjct: 401 LHSEKLLAFKMTEQQ 415


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 52 IICLFYCDL*NLNTV 96
          ++C+ YC L + +TV
Sbjct: 8  LLCVIYCALVHADTV 22


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 52 IICLFYCDL*NLNTV 96
          ++C+ YC L + +TV
Sbjct: 8  LLCVIYCALVHADTV 22


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 167 HCLKTLQKV 193
           HC+KT Q V
Sbjct: 88  HCMKTTQAV 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,834
Number of Sequences: 438
Number of extensions: 970
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)