Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13j05
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033510-8|CAA22061.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.82
AL033510-9|CAL49451.1| 291|Caenorhabditis elegans Hypothetical ... 29 2.5
AF039042-3|AAP40513.1| 359|Caenorhabditis elegans Serpentine re... 28 4.4
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 27 7.6
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 27 7.6
U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division c... 27 7.6
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 27 7.6
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 27 7.6
AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14 phosph... 27 7.6
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 27 7.6
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 27 7.6
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 27 7.6
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 27 7.6
AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical... 27 7.6
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 27 7.6
>AL033510-8|CAA22061.1| 291|Caenorhabditis elegans Hypothetical
protein Y40H7A.4a protein.
Length = 291
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 411 SGEWIFLVFFNGQVVMTTKWYTESVI--EIEYFPVNLNDPDHQLMVADSPIVVILRS 575
+G ++ LV F ++ +Y ++ IE P + N P+HQL+ +DSPI + R+
Sbjct: 11 AGYFLILVIF---ILFIANYYRLVILLETIEKLPPDTNYPNHQLLDSDSPIRELRRA 64
>AL033510-9|CAL49451.1| 291|Caenorhabditis elegans Hypothetical
protein Y40H7A.4b protein.
Length = 291
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 492 IEYFPVNLNDPDHQLMVADSPIVVILRS 575
IE P + N P+HQL+ +DSPI + R+
Sbjct: 37 IEKLPPDTNYPNHQLLDSDSPIRELRRA 64
>AF039042-3|AAP40513.1| 359|Caenorhabditis elegans Serpentine
receptor, class w protein101 protein.
Length = 359
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 405 PSSGEWIFLVFFNGQVVMTTKWYTE-SVIEIEYFPVNLNDPDHQLMVADSPIVVILRSVS 581
P G + + F ++TT W E VIE +P++ N +HQ + +ILR VS
Sbjct: 145 PIFGISLMAIVFGISGILTTVWQYECQVIENRTYPLSPNCAEHQDIHGVFRFSLILRPVS 204
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division
cycle related protein14, isoform e protein.
Length = 707
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14
phosphatase isoform E protein.
Length = 707
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
>AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical
protein Y56A3A.15 protein.
Length = 292
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 237 ECYAYVLCRNGKIRLIVIIPH 175
E AYVLCR+ I+L+++ P+
Sbjct: 111 EHVAYVLCRHNSIKLVILEPN 131
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 467 FCGHHNLSVEEN*EYPFAGTWWLADHLQEN 378
FCG HN S EEN YP+ D+ +EN
Sbjct: 208 FCGPHNESREEN-GYPYHAPDVYFDYFREN 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,872
Number of Sequences: 27780
Number of extensions: 256989
Number of successful extensions: 686
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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