Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13j05
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              24   0.98 
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              24   0.98 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   6.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.1  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 9/42 (21%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = -2

Query: 552 DYRQPLIDDLDHLSLLENILFQLRSQCTILWSSQL-VR*RKL 430
           ++++ ++ +L  + L EN++ +L ++C+++  + + +R  KL
Sbjct: 78  NFKENIVQELTSIYLDENVIKKLVAECSVISDANIYIRFNKL 119


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 9/42 (21%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = -2

Query: 552 DYRQPLIDDLDHLSLLENILFQLRSQCTILWSSQL-VR*RKL 430
           ++++ ++ +L  + L EN++ +L ++C+++  + + +R  KL
Sbjct: 78  NFKENIVQELTSIYLDENVIKKLVAECSVISDANIYIRFNKL 119


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 483 VIEIEYFPVNLNDPDHQLMVADSPIVVIL 569
           V E+ YF  ++  P H+L V  + +V I+
Sbjct: 160 VAEVCYFTAHVTHPRHRLCVFVAGVVFIV 188


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 201 IRLIVIIPH*MSLIYTSFIIINY-GYIR 121
           I LIV+I     ++Y +FII+ Y G +R
Sbjct: 402 ICLIVVIALVSIIMYIAFIILQYAGLLR 429


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 354 EYHHLPPP 331
           EYHH+ PP
Sbjct: 509 EYHHVAPP 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,963
Number of Sequences: 438
Number of extensions: 3736
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)