Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13j02
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr...    27   2.8  
Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical pr...    26   6.4  
U58732-6|AAB00596.3|  333|Caenorhabditis elegans Serpentine rece...    26   8.5  
U58732-5|AAW88398.1|  337|Caenorhabditis elegans Serpentine rece...    26   8.5  

>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
           protein F54F3.1 protein.
          Length = 1584

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 178 TCC*HANAGYYQCFCSG*FVVTG 246
           +C  H + GYYQC C+  +V  G
Sbjct: 910 SCAYHHSLGYYQCACTEPYVGNG 932


>Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical
           protein F37B1.8 protein.
          Length = 207

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 212 SASAVGNSLSLADAVLANNTNIHQNF 289
           S   +GNS++ AD V+ NN    +NF
Sbjct: 146 SGFLIGNSITYADLVVVNNLETLRNF 171


>U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical
           protein C09F5.1 protein.
          Length = 571

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 342 FTQNLYCSF*CIILTIMMKFWWMFVLFAKTASASDNELPTAEALIISGIC 193
           +T  L  S  CI+L +++  + MF++F    +A  N    +E L+   +C
Sbjct: 279 YTPELLRSLCCILLLLLLLLFLMFIIF----NAIFNRYAVSEFLLYPPVC 324


>U58732-6|AAB00596.3|  333|Caenorhabditis elegans Serpentine
           receptor, class v protein5, isoform a protein.
          Length = 333

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 285 FWWMFVLFAKTASASDNELPTAEALIISGICMSATC 178
           F + F++ + +   +++ L TA    + GIC   TC
Sbjct: 152 FTYWFMITSSSIRLTNDSLSTALVAYVDGICCLGTC 187


>U58732-5|AAW88398.1|  337|Caenorhabditis elegans Serpentine
           receptor, class v protein5, isoform b protein.
          Length = 337

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 285 FWWMFVLFAKTASASDNELPTAEALIISGICMSATC 178
           F + F++ + +   +++ L TA    + GIC   TC
Sbjct: 156 FTYWFMITSSSIRLTNDSLSTALVAYVDGICCLGTC 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,725,717
Number of Sequences: 27780
Number of extensions: 134268
Number of successful extensions: 284
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)