Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13i24
         (466 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK057217-1|BAB71383.1|  621|Homo sapiens protein ( Homo sapiens ...    29   6.0  
BC128540-1|AAI28541.1|  488|Homo sapiens MAP9 protein protein.         29   7.9  
BC056683-1|AAH56683.1|  278|Homo sapiens MAP9 protein protein.         29   7.9  
BC022852-1|AAH22852.1|  441|Homo sapiens Unknown (protein for IM...    29   7.9  

>AK057217-1|BAB71383.1|  621|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32655 fis, clone TESTI1000025, weakly similar to
           M.musculus mRNA for testis-specific protein, DDC8. ).
          Length = 621

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/78 (24%), Positives = 35/78 (44%)
 Frame = +3

Query: 126 KNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAK 305
           K E      K+ ES    E+ +    + +     K + +  +  L +LKS S+++  + +
Sbjct: 506 KAEMEQRRQKQLESLEQMEHPDMSLEIHYKAELEKERREQRRARLAHLKSSSTRAQERER 565

Query: 306 GGVLLKSSDQNMNLTDDD 359
           G  L  +S    +L DDD
Sbjct: 566 GSELSTTSPSGTSLADDD 583


>BC128540-1|AAI28541.1|  488|Homo sapiens MAP9 protein protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
 Frame = +3

Query: 24  SDCSNGQICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKI 203
           SD S  +  +NKKM++F            ++ L  N+ N   +K+E    I +N E    
Sbjct: 60  SDTSADENSVNKKMNDFHISDDEEKNPSKLLFLKTNKSNGNITKDEPVCAI-KNEEEMAP 118

Query: 204 VDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVL-LKSSDQNMNLTDDDDPY 368
               ++  K   +S     ++ + +  K   K K  +L +KS+    N  D DD +
Sbjct: 119 DGCEDIVVKSFSESQN---KDEEFEKDKIKMKPKPRILSIKSTSSENNSLDTDDHF 171


>BC056683-1|AAH56683.1|  278|Homo sapiens MAP9 protein protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
 Frame = +3

Query: 24  SDCSNGQICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKI 203
           SD S  +  +NKKM++F            ++ L  N+ N   +K+E    I +N E    
Sbjct: 76  SDTSADENSVNKKMNDFHISDDEEKNPSKLLFLKTNKSNGNITKDEPVCAI-KNEEEMAP 134

Query: 204 VDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVL-LKSSDQNMNLTDDDDPY 368
               ++  K   +S     ++ + +  K   K K  +L +KS+    N  D DD +
Sbjct: 135 DGCEDIVVKSFSESQN---KDEEFEKDKIKMKPKPRILSIKSTSSENNSLDTDDHF 187


>BC022852-1|AAH22852.1|  441|Homo sapiens Unknown (protein for
           IMAGE:4079119) protein.
          Length = 441

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
 Frame = +3

Query: 24  SDCSNGQICINKKMDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKI 203
           SD S  +  +NKKM++F            ++ L  N+ N   +K+E    I +N E    
Sbjct: 60  SDTSADENSVNKKMNDFHISDDEEKNPSKLLFLKTNKSNGNITKDEPVCAI-KNEEEMAP 118

Query: 204 VDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVL-LKSSDQNMNLTDDDDPY 368
               ++  K   +S     ++ + +  K   K K  +L +KS+    N  D DD +
Sbjct: 119 DGCEDIVVKSFSESQN---KDEEFEKDKIKMKPKPRILSIKSTSSENNSLDTDDHF 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,699,734
Number of Sequences: 237096
Number of extensions: 828503
Number of successful extensions: 1991
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)