Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13i19
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0875 - 25584789-25585307,25585424-25585570,25585734-255858... 75 3e-14
08_01_0002 - 20208-20594,21525-21671,21754-21917,22005-22162,245... 62 3e-10
02_04_0346 - 22183145-22183264,22183877-22183966,22184140-221842... 56 3e-08
08_02_0785 + 21190002-21190253,21190452-21190523,21191498-211916... 55 4e-08
05_07_0040 + 27243195-27243428,27243665-27243736,27243837-272439... 54 8e-08
05_03_0659 - 16715437-16715520,16715607-16715714,16715788-167158... 54 1e-07
04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32... 53 1e-07
01_05_0670 - 24159922-24160014,24160127-24160410,24160856-241609... 52 4e-07
01_06_1646 - 38887178-38887271,38888230-38888270,38888744-388888... 51 6e-07
11_06_0334 + 22437187-22437322,22437430-22437515,22437927-224380... 50 1e-06
01_02_0112 - 11230202-11230282,11230362-11230469,11230588-112306... 50 1e-06
02_01_0256 + 1680240-1680485,1680950-1681024,1681527-1681776,168... 47 1e-05
08_02_0523 + 18150425-18150629,18150822-18150881,18150882-181509... 46 2e-05
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 44 7e-05
02_01_0486 - 3495792-3496034,3496862-3496934,3497128-3497422,349... 44 9e-05
11_06_0305 + 22209640-22209736,22212679-22212941,22213444-222135... 31 3e-04
05_05_0064 + 22063951-22064462,22066344-22066566 41 6e-04
10_08_0403 - 17635530-17635578,17635737-17635820,17636110-176362... 39 0.003
05_02_0096 - 6568030-6568252,6570998-6571281 36 0.024
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 34 0.096
08_02_1103 - 24329120-24329623 33 0.13
01_07_0030 + 40601063-40601182,40601684-40602116,40602217-406023... 33 0.13
01_06_0302 - 28318910-28318999,28319118-28319210,28319303-283193... 33 0.17
01_01_0131 - 1186129-1186242,1186640-1186720,1186843-1186993,118... 33 0.17
07_03_0284 + 16249497-16249993,16250950-16251069,16251166-162512... 32 0.29
09_04_0102 + 14618475-14618729,14620446-14620510,14620624-146207... 31 0.51
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 31 0.51
06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750 31 0.68
09_03_0128 + 12584166-12585320 30 1.2
09_04_0457 - 17736158-17737336 29 2.1
04_04_1700 - 35465563-35465625,35465748-35465875,35466018-354660... 29 2.1
04_04_0897 - 29186821-29187459 29 2.1
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 28 4.8
02_02_0327 - 8983983-8985878 28 6.3
05_07_0020 + 27097140-27097676,27097857-27098036,27099361-270994... 27 8.3
>06_03_0875 -
25584789-25585307,25585424-25585570,25585734-25585897,
25586015-25586172,25586536-25586904,25586998-25587209,
25587439-25588059,25588561-25588699,25588968-25589044,
25589120-25589800,25590641-25590889
Length = 1111
Score = 75.4 bits (177), Expect = 3e-14
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +3
Query: 384 DICRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNF 542
D+CRIC + ++PL PC CSGS+K+VHQ CL QWL S +R CE+CK F
Sbjct: 37 DVCRICRNPGDDEHPLRYPCACSGSIKFVHQDCLLQWLDHSNSRQCEVCKHAF 89
>08_01_0002 -
20208-20594,21525-21671,21754-21917,22005-22162,
24533-24826,24916-25121,25216-25812,26366-27097
Length = 894
Score = 62.1 bits (144), Expect = 3e-10
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
CRIC +E PL PC C GS+++VH CL +WL T CE+CK
Sbjct: 30 CRICRVPAEAGRPLRHPCACRGSIRFVHDDCLLRWLATRRTSHCEVCK 77
>02_04_0346 -
22183145-22183264,22183877-22183966,22184140-22184220,
22184430-22184589,22184723-22184787,22185370-22185441,
22186163-22186327
Length = 250
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNF 542
CRIC E +N L +PC CSGSLKY H+ C+Q+W CE+C ++
Sbjct: 32 CRICQEEDLAKN-LESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSY 81
>08_02_0785 +
21190002-21190253,21190452-21190523,21191498-21191631,
21191700-21191850,21191938-21192087
Length = 252
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELC 530
CRIC E N L +PC C+GSLKY H++C+Q+W +CE+C
Sbjct: 61 CRICQEEDNISN-LESPCACTGSLKYAHRACVQRWCDEKGDLTCEIC 106
>05_07_0040 +
27243195-27243428,27243665-27243736,27243837-27243904,
27243987-27244113,27244514-27244669
Length = 218
Score = 54.0 bits (124), Expect = 8e-08
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELC 530
CRIC E + Q + PC C GSLKY H+ C+Q+W CE+C
Sbjct: 55 CRICQ-EEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEIC 100
>05_03_0659 -
16715437-16715520,16715607-16715714,16715788-16715871,
16715963-16716095,16717051-16717118,16717528-16717599,
16717771-16717843,16718038-16718057
Length = 213
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 396 ICHCESEPQNPLL-APCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNFIMHTKIKP 566
ICH E + + +PC CSGSLKY H+ C+Q+W + CE+C NF I P
Sbjct: 8 ICHEEEDEWCAAIESPCGCSGSLKYAHRGCVQRWCDEKGSTLCEICLQNFESDYTIPP 65
>04_01_0022 +
324422-324445,324870-325265,325366-325546,325781-326072,
326389-326461,326610-326700,326815-326894,326992-327234
Length = 459
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 387 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
+CRIC E SE + L C C G L H+ C +W T TR+CE+CK
Sbjct: 214 VCRICMVELSEGSDTLKLECSCKGELALAHKHCAMKWFTMKGTRTCEVCK 263
>01_05_0670 -
24159922-24160014,24160127-24160410,24160856-24160979,
24161174-24161320,24161752-24161837,24162039-24162234
Length = 309
Score = 51.6 bits (118), Expect = 4e-07
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 390 CRIC-HCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRS---CELCKFNF 542
CRIC E+EP + L++PC C G+ ++VH+ CL W + E + C CK F
Sbjct: 55 CRICLESETEPGDELISPCMCKGTQQFVHRYCLDHWRSVKEGTAFSHCTTCKAQF 109
>01_06_1646 -
38887178-38887271,38888230-38888270,38888744-38888827,
38888933-38889080,38889232-38889299,38889563-38889634,
38890479-38890673
Length = 233
Score = 51.2 bits (117), Expect = 6e-07
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELC 530
CRIC E + + + +PC C+G+LK+ H+ C+Q+W +CE+C
Sbjct: 42 CRICQEEGD-EGAMDSPCACTGTLKFAHRKCIQRWCDKKGNITCEIC 87
>11_06_0334 +
22437187-22437322,22437430-22437515,22437927-22438073,
22438166-22438274,22439510-22439633,22439727-22439752,
22439774-22440000,22440084-22440185
Length = 318
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASE---TRSCELCKFNFIMHTKI 560
CRIC E++ ++ +APC C G+ KYVH+ CL W E C CK + + +
Sbjct: 38 CRIC-LETDGRD-FIAPCKCKGTSKYVHRDCLDHWRAVKEGFAFSHCTTCKAPYYLRVHV 95
Query: 561 KPFNEWR 581
+WR
Sbjct: 96 HTDRKWR 102
>01_02_0112 -
11230202-11230282,11230362-11230469,11230588-11230671,
11230791-11230920,11231864-11231931,11232412-11232483,
11232670-11232705
Length = 192
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 435 APCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNF 542
+PC CSGSLKY H+ C+Q+W + CE+C NF
Sbjct: 3 SPCGCSGSLKYAHRGCVQRWCDEKGSTLCEICLQNF 38
>02_01_0256 +
1680240-1680485,1680950-1681024,1681527-1681776,
1681910-1681995,1682669-1682771,1683490-1683602,
1684259-1684351
Length = 321
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 494
CRIC ++E + L+APC+C G+ KYVH+SCL W
Sbjct: 183 CRIC-LDNEGDD-LIAPCHCKGTQKYVHRSCLDNW 215
>08_02_0523 +
18150425-18150629,18150822-18150881,18150882-18150967,
18151802-18151948,18152712-18152835,18152990-18153366
Length = 332
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 429 LLAPCYCSGSLKYVHQSCLQQWLTASE---TRSCELCKFNFIMHTKIKPFNEWR 581
L++PC C G+ ++VH+SCL W + E C CK F + + N WR
Sbjct: 92 LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVETWEDNSWR 145
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 387 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
+CRIC E +E L C C G L HQ C +W + + C++CK
Sbjct: 250 VCRICLVELNEGGETLKMECSCKGELALAHQDCAVKWFSIKGNKICDVCK 299
>02_01_0486 -
3495792-3496034,3496862-3496934,3497128-3497422,
3497585-3497759,3498349-3498795,3499994-3500053
Length = 430
Score = 44.0 bits (99), Expect = 9e-05
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 387 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
+CRIC E +E L C C G L HQ C +W + ++C++C+
Sbjct: 242 VCRICLVELNEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCR 291
>11_06_0305 +
22209640-22209736,22212679-22212941,22213444-22213530,
22214866-22214937,22215729-22215793,22215918-22216050,
22216397-22216477,22216599-22216688,22217954-22218103
Length = 345
Score = 31.1 bits (67), Expect(2) = 3e-04
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLK 464
CRIC E +N L PC CSGSLK
Sbjct: 97 CRICQEEDSIKN-LEKPCACSGSLK 120
Score = 30.3 bits (65), Expect(2) = 3e-04
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 459 LKYVHQSCLQQWLTASETRSCELC 530
L Y H++C+Q+W +CE+C
Sbjct: 148 LPYAHRACVQRWCNEKGDITCEIC 171
>05_05_0064 + 22063951-22064462,22066344-22066566
Length = 244
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 390 CRICH-----CESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELC 530
CRICH +E + C C G L Y H+ C + W + CE+C
Sbjct: 125 CRICHLGLETAAAESGAGITLGCSCKGDLSYSHKQCAETWFKIRGNKICEIC 176
>10_08_0403 -
17635530-17635578,17635737-17635820,17636110-17636219,
17637507-17637638,17638497-17638576,17638877-17639008,
17639534-17639648,17640244-17640286,17640359-17640493,
17641347-17641414,17641473-17641478
Length = 317
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 405 CESEPQNPLL-APCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
C+ + + PL+ C C G L H++C+ W + CE+C+
Sbjct: 27 CQQKTEEPLVDLGCRCRGDLSKAHRTCISVWFRTRGSNKCEICQ 70
>05_02_0096 - 6568030-6568252,6570998-6571281
Length = 168
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Frame = +3
Query: 390 CRICH----------CESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELC 530
CRICH ES + C C G L H+ C + W + R CE+C
Sbjct: 44 CRICHLGGGGDGEMAAESGSGRLVRLGCGCRGELAAAHRRCAEAWFSVRGNRRCEIC 100
>01_07_0383 - 43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNF 542
C IC+ N L C H +CL +W + S +C LC+ F
Sbjct: 1852 CPICYSILHTSNHSLPRLACKTCRHKFHGACLYKWFSTSNKSTCPLCQTPF 1902
>08_02_1103 - 24329120-24329623
Length = 167
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 390 CRICHCESEPQNPL-LAPCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNFIMHTKIKP 566
CR+C EP++ + PC G L H++CL++WL +C LC+ + T P
Sbjct: 100 CRVCLARFEPESVVNRLPC---GHL--FHRACLEKWLDYDHA-TCPLCRHRLLPATTESP 153
>01_07_0030 +
40601063-40601182,40601684-40602116,40602217-40602326,
40602506-40602550
Length = 235
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 384 DICRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELC 530
D+C C E P NP + CS + H SC+ +W+ S+T C +C
Sbjct: 177 DVCPTCLEEYTPDNPKII-AKCS---HHYHLSCIYEWMERSDT--CPIC 219
>01_06_0302 -
28318910-28318999,28319118-28319210,28319303-28319383,
28319483-28319633,28319716-28319783,28319989-28320143,
28320268-28320326,28320649-28320899
Length = 315
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 441 CYCSGSLKYVHQSCLQQWLTASETRSCELCKFNF 542
C+C L+Y H +C+Q+W CE+C F
Sbjct: 127 CHC---LQYAHHACIQRWCNEKGDTVCEICLQQF 157
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLK 464
CRIC E + ++ + PC C GSLK
Sbjct: 59 CRICQEEGD-ESYMETPCCCKGSLK 82
>01_01_0131 -
1186129-1186242,1186640-1186720,1186843-1186993,
1187100-1187167,1187323-1187438,1188108-1188366
Length = 262
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 414 EPQNPLLAPC-YCSGSLKYVHQSCLQQWLTASETRSCELCKFNF 542
+PQ L + + L+Y H+ C+Q+W CE+C F
Sbjct: 84 QPQGEFLQDIKFLASPLQYAHRKCIQRWCNEKGDTVCEICLQQF 127
>07_03_0284 +
16249497-16249993,16250950-16251069,16251166-16251298,
16251867-16252031,16253289-16253459
Length = 361
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 390 CRICHCESEPQNPLLA-PCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNFI 545
C IC C E L PC + H +C+ +WL + T C LCKFN I
Sbjct: 307 CCICLCPYEDGAELRELPCN-----HHFHCTCIDKWLHINAT--CPLCKFNII 352
>09_04_0102 +
14618475-14618729,14620446-14620510,14620624-14620774,
14620894-14620971,14621065-14621154,14621547-14621669
Length = 253
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLK-YVH 473
CRIC E +N L +PC C+GSLK Y H
Sbjct: 62 CRICQEEDSIKN-LESPCACTGSLKPYEH 89
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 387 ICRICHCESEPQNPLLAPCYCSGSLKYVHQSCL-QQWL-TASETRSCELCK 533
+C+IC+ E E LL +CSG ++VH CL W ++ SC CK
Sbjct: 641 MCQICNTEEE--KTLLL--HCSGCSRHVHPGCLTPPWTGVLTDDWSCYTCK 687
>06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750
Length = 433
Score = 31.1 bits (67), Expect = 0.68
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 441 CYCSGSLKYVHQSCLQQWLTASETRSCELC 530
C C G L H C +W + +C++C
Sbjct: 285 CRCKGELALAHGDCAVKWFSIKGNATCDVC 314
>09_03_0128 + 12584166-12585320
Length = 384
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
C +C CE + + L C + H +C+ WL +S T C LC+
Sbjct: 144 CAVCLCEFDGGDRLRLLPLCGHAF---HAACIDTWLRSSST--CPLCR 186
>09_04_0457 - 17736158-17737336
Length = 392
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCKFNFI 545
C +C E + L CS HQ C+ WL + T C +C+ N +
Sbjct: 125 CAVCISEFDDDETLRLLPKCS---HVFHQDCIDTWLASHAT--CPVCRANLV 171
>04_04_1700 -
35465563-35465625,35465748-35465875,35466018-35466096,
35466818-35467624
Length = 358
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +3
Query: 441 CYCSGSLKYVHQSCLQQWLTASETRSCELC 530
C C L H +C +W + CE+C
Sbjct: 107 CSCKNDLALAHYACALKWFITHGSTVCEIC 136
>04_04_0897 - 29186821-29187459
Length = 212
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 471 HQSCLQQWLTASETRSCELCK 533
H+ CL +W+ + R+C LC+
Sbjct: 136 HRGCLDRWMEHDDQRTCPLCR 156
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
C IC E P + A C Y H +C+QQWL + C +CK
Sbjct: 300 CIICQEEYLPAEEV-AEMACK---HYYHLACIQQWL--RQKNWCPICK 341
>02_02_0327 - 8983983-8985878
Length = 631
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 478 VACSSG*RHPRQDLVSYANLTSSCTLKSNRSMSGVC 585
VAC+SG P+Q S N T +K R SG C
Sbjct: 225 VACTSGLSRPQQRSSSTKNCTYPGCMKGARGSSGRC 260
>05_07_0020 +
27097140-27097676,27097857-27098036,27099361-27099456,
27099557-27099706,27099794-27099925
Length = 364
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 390 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTASETRSCELCK 533
C IC E E N C S H C++QWL+ T C +CK
Sbjct: 317 CSICQEEFEA-NEETGRLICGHSY---HVQCIKQWLSRKNT--CPVCK 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,842,419
Number of Sequences: 37544
Number of extensions: 261240
Number of successful extensions: 785
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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