Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13i09
         (306 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93778-8|CAB07848.4|  437|Caenorhabditis elegans Hypothetical pr...    29   0.64 
U95181-1|AAD00776.1|  437|Caenorhabditis elegans 2,5 dihydroxyph...    29   0.64 
AL034364-5|CAA22255.4|  437|Caenorhabditis elegans Hypothetical ...    29   0.64 
AF136150-1|AAF61419.1|  437|Caenorhabditis elegans homogentisate...    29   0.64 
AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    27   3.4  
AF024500-2|AAB70360.1|  467|Caenorhabditis elegans Hypothetical ...    27   3.4  
AF000266-7|AAC71173.1|  212|Caenorhabditis elegans Hypothetical ...    25   7.9  

>Z93778-8|CAB07848.4|  437|Caenorhabditis elegans Hypothetical
           protein W06D4.1 protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -3

Query: 52  AFMFESSLSLAITKW 8
           +FMFESSL++AIT W
Sbjct: 398 SFMFESSLNMAITNW 412


>U95181-1|AAD00776.1|  437|Caenorhabditis elegans 2,5
           dihydroxyphenylacetate oxidase protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -3

Query: 52  AFMFESSLSLAITKW 8
           +FMFESSL++AIT W
Sbjct: 398 SFMFESSLNMAITNW 412


>AL034364-5|CAA22255.4|  437|Caenorhabditis elegans Hypothetical
           protein W06D4.1 protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -3

Query: 52  AFMFESSLSLAITKW 8
           +FMFESSL++AIT W
Sbjct: 398 SFMFESSLNMAITNW 412


>AF136150-1|AAF61419.1|  437|Caenorhabditis elegans homogentisate
           1,2-dioxygenase protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 0.64
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -3

Query: 52  AFMFESSLSLAITKW 8
           +FMFESSL++AIT W
Sbjct: 398 SFMFESSLNMAITNW 412


>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = +2

Query: 38  FKHKSL*KEILMLTSIWIQNACPG*IGLNYFLKLMSYFILVLM*VPI*TTRFIVFTYKIK 217
           F    L + ++ L ++ IQ  C   I  N +LKL ++FI++ +   I + R  VF Y I 
Sbjct: 44  FSSSILAQNVVSLINLVIQLFCVCFIWKNGYLKLSTFFIILFIHSSIISLR--VFVYIIS 101

Query: 218 TI 223
           ++
Sbjct: 102 SL 103


>AF024500-2|AAB70360.1|  467|Caenorhabditis elegans Hypothetical
           protein K06H6.4 protein.
          Length = 467

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 199 YNKSSCSNRYLHQYKNEI*HKFKKII*SNSSRACILNPN 83
           YN S+   RY    + EI   F+ +I   S+  C L PN
Sbjct: 109 YNSSTMYCRYYDCRRREISDPFQNVIFHKSTVFCALRPN 147


>AF000266-7|AAC71173.1|  212|Caenorhabditis elegans Hypothetical
           protein W08F4.9 protein.
          Length = 212

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 11  LGDGQTQRRFKHKSL*KEILMLTSIWIQNA 100
           L + +T R   H    K++ +   IWIQN+
Sbjct: 110 LSNSRTLRSLHHSMTAKDVNLFLKIWIQNS 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,303,129
Number of Sequences: 27780
Number of extensions: 90171
Number of successful extensions: 163
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)