Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13h18
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03717-1|CAB43589.1| 152|Homo sapiens protein ( Human RNA trans... 33 0.79
Z97832-1|CAI20187.1| 993|Homo sapiens protein ( Human DNA seque... 30 7.3
Z92544-4|CAM26350.1| 373|Homo sapiens rhomboid, veinlet-like 1 ... 30 7.3
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 30 7.3
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 30 7.3
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 30 7.3
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 30 7.3
BC052263-1|AAH52263.2| 992|Homo sapiens signal peptide, CUB dom... 30 7.3
AY639608-1|AAU08347.1| 993|Homo sapiens signal peptide, CUB and... 30 7.3
AJ272344-1|CAC00640.1| 373|Homo sapiens rhomboid-related protei... 30 7.3
AF452494-1|AAN76808.1| 993|Homo sapiens CUB and EGF containing ... 30 7.3
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 30 7.3
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 30 9.7
BC129989-1|AAI29990.1| 120|Homo sapiens NUFIP2 protein protein. 30 9.7
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 30 9.7
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 30 9.7
AK092062-1|BAC03798.1| 880|Homo sapiens protein ( Homo sapiens ... 30 9.7
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 30 9.7
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 30 9.7
>X03717-1|CAB43589.1| 152|Homo sapiens protein ( Human RNA
transcribed from L1 repetitive element (SHR4). ).
Length = 152
Score = 33.5 bits (73), Expect = 0.79
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPPNGKFTINLLKDSCSKFVSNNYLIIGDFNAHHA----S 418
I++ I IL +Y P +F +L D + + ++ LI+GDFN + S
Sbjct: 6 IMVKGSIQQEELTILNIYAPNTGAPRFIKQVLSD-LQRDLESHTLIMGDFNTPLSTLDRS 64
Query: 417 WSSRVN---DRRGKALH--DYVESSELVCLNDDTITTFAPFGQQGNVLDLVFASPALSSS 253
+VN ALH D S+EL N I F+ + +D + S AL S
Sbjct: 65 TRQKVNKDTQELNSALHQADLKTSTELSTPNQQNIHFFSAPHHTYSKIDHILGSKALLSK 124
Query: 252 CTVSVLDDLLSSNHFPLFIEV 190
C + + S+H + +E+
Sbjct: 125 CKRTEIITNYLSDHSAIKLEL 145
>Z97832-1|CAI20187.1| 993|Homo sapiens protein ( Human DNA sequence
from clone RP3-329A5 on chromosome 6p21.1-21.33
Contains the gene for a novel EGF-like and CUB domain
protein ).
Length = 993
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 705 AGFNVIRRDSNHPHGGVAIALRSKYKFKIIDTISQYHFQN 586
AG N +SNH H ++++ + FKI D + H +N
Sbjct: 459 AGHNGNSTNSNHCHEAAVLSIKQRASFKIKDAKCRLHLRN 498
>Z92544-4|CAM26350.1| 373|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 373
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPP 517
+L ++ N F++D+L +IPPPP
Sbjct: 351 LLFAVFWNVFAYDLLGAHIPPPP 373
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPP 517
+L ++ N F++D+L +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPP 517
+L ++ N F++D+L +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPP 517
+L ++ N F++D+L +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPP 517
+L ++ N F++D+L +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438
>BC052263-1|AAH52263.2| 992|Homo sapiens signal peptide, CUB
domain, EGF-like 3 protein.
Length = 992
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 705 AGFNVIRRDSNHPHGGVAIALRSKYKFKIIDTISQYHFQN 586
AG N +SNH H ++++ + FKI D + H +N
Sbjct: 458 AGHNGNSTNSNHCHEAAVLSIKQRASFKIKDAKCRLHLRN 497
>AY639608-1|AAU08347.1| 993|Homo sapiens signal peptide, CUB and
EGF-like domain containing protein 3 protein.
Length = 993
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 705 AGFNVIRRDSNHPHGGVAIALRSKYKFKIIDTISQYHFQN 586
AG N +SNH H ++++ + FKI D + H +N
Sbjct: 459 AGHNGNSTNSNHCHEAAVLSIKQRASFKIKDAKCRLHLRN 498
>AJ272344-1|CAC00640.1| 373|Homo sapiens rhomboid-related protein
protein.
Length = 373
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPP 517
+L ++ N F++D+L +IPPPP
Sbjct: 351 LLFAVFWNVFAYDLLGAHIPPPP 373
>AF452494-1|AAN76808.1| 993|Homo sapiens CUB and EGF containing
protein protein.
Length = 993
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 705 AGFNVIRRDSNHPHGGVAIALRSKYKFKIIDTISQYHFQN 586
AG N +SNH H ++++ + FKI D + H +N
Sbjct: 459 AGHNGNSTNSNHCHEAAVLSIKQRASFKIKDAKCRLHLRN 498
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 585 ILITIYINNFSFDILCVYIPPPP 517
+L ++ N F++D+L +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 29.9 bits (64), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 336 HHLNKPTQNFPHNHEGLYLFYH*LLNSRKHDVH*SHQLLNNYLK 467
HH + Q PH+H Y + H S H H HQ + YL+
Sbjct: 20 HHHPQQQQQQPHHHHHYYFYNH----SHNHHHHHHHQQPHQYLQ 59
>BC129989-1|AAI29990.1| 120|Homo sapiens NUFIP2 protein protein.
Length = 120
Score = 29.9 bits (64), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 336 HHLNKPTQNFPHNHEGLYLFYH*LLNSRKHDVH*SHQLLNNYLK 467
HH + Q PH+H Y + H S H H HQ + YL+
Sbjct: 20 HHHPQQQQQQPHHHHHYYFYNH----SHNHHHHHHHQQPHQYLQ 59
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 29.9 bits (64), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 336 HHLNKPTQNFPHNHEGLYLFYH*LLNSRKHDVH*SHQLLNNYLK 467
HH + Q PH+H Y + H S H H HQ + YL+
Sbjct: 20 HHHPQQQQQQPHHHHHYYFYNH----SHNHHHHHHHQQPHQYLQ 59
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 29.9 bits (64), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 336 HHLNKPTQNFPHNHEGLYLFYH*LLNSRKHDVH*SHQLLNNYLK 467
HH + Q PH+H Y + H S H H HQ + YL+
Sbjct: 20 HHHPQQQQQQPHHHHHYYFYNH----SHNHHHHHHHQQPHQYLQ 59
>AK092062-1|BAC03798.1| 880|Homo sapiens protein ( Homo sapiens
cDNA FLJ34743 fis, clone MESAN2009019, moderately
similar to CEGP1 protein. ).
Length = 880
Score = 29.9 bits (64), Expect = 9.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 705 AGFNVIRRDSNHPHGGVAIALRSKYKFKIIDTISQYHFQN 586
AG N +SNH H ++++ + FKI D + H +N
Sbjct: 346 AGHNGNSTNSNHCHEAAVLSIKQRSPFKIKDAKCRLHLRN 385
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 29.9 bits (64), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 336 HHLNKPTQNFPHNHEGLYLFYH*LLNSRKHDVH*SHQLLNNYLK 467
HH + Q PH+H Y + H S H H HQ + YL+
Sbjct: 20 HHHPQQQQQQPHHHHHYYFYNH----SHNHHHHHHHQQPHQYLQ 59
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 29.9 bits (64), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 336 HHLNKPTQNFPHNHEGLYLFYH*LLNSRKHDVH*SHQLLNNYLK 467
HH + Q PH+H Y + H S H H HQ + YL+
Sbjct: 39 HHHPQQQQQQPHHHHHYYFYNH----SHNHHHHHHHQQPHQYLQ 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,327,052
Number of Sequences: 237096
Number of extensions: 1766874
Number of successful extensions: 2979
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2979
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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