Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13h12
         (252 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   1.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   1.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   1.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   4.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   5.5  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         19   7.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   9.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   9.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   9.6  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 212 PLWKLIPT 235
           PLWKL+PT
Sbjct: 258 PLWKLLPT 265


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 240 TKVGISFHKGANRLNGERFSH 178
           ++VG  +H+    +N ERF +
Sbjct: 199 SRVGTKYHRSGGLMNVERFPY 219


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = +3

Query: 42  RKCSHRVSLRFSSLSPVSQR*RLCLPGTKKLSRSPSPLQMTS 167
           R  S R S RFSS S V +R       +   SRSPSP  +TS
Sbjct: 18  RSRSRRYSKRFSS-SIVDRR-------SPSSSRSPSPSLLTS 51


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 208 KQTEWRKVQPWERE-LVICNGDGLRDN 131
           K TE+R  +PW  + L+I  G   R++
Sbjct: 111 KSTEYRFFKPWLGDGLLISTGQKWRNH 137


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 154 NGDGLRDNFFVPGRQSRYRCETGESDE 74
           NG+G R +     + S+Y  E  ESD+
Sbjct: 671 NGEGTRADICQLLKDSQYIREQTESDD 697


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 165 WSSVMETGCAITSLSRAGK 109
           W S+  + CAI  L++  K
Sbjct: 73  WLSINHSACAIRCLAQRRK 91


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 66  LRFSSLSPVSQR*RLCLPGTK 128
           LR+  L P   +  L +PG K
Sbjct: 432 LRYKKLQPQYSQSELQMPGVK 452


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 66  LRFSSLSPVSQR*RLCLPGTK 128
           LR+  L P   +  L +PG K
Sbjct: 432 LRYKKLQPQYSQSELQMPGVK 452


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +2

Query: 47   MFSPRLFAVFIAFAGFATVTALPARDKEVIAQPVSITD 160
            +FSP+L+ + I        + +P R     +  V+ T+
Sbjct: 897  LFSPKLYIILIRPERNVRQSMMPTRYSTTKSSAVTATN 934


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,476
Number of Sequences: 438
Number of extensions: 1484
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4527252
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)