Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13h06
(198 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces p... 109 7e-26
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 96 7e-22
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 25 1.8
SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Ma... 24 3.2
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 23 5.6
SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|ch... 23 5.6
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 23 7.4
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 23 7.4
SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit Sen2|Sc... 23 7.4
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 22 9.7
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom... 22 9.7
>SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 289
Score = 109 bits (261), Expect = 7e-26
Identities = 46/62 (74%), Positives = 52/62 (83%)
Frame = +1
Query: 10 LNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEI 189
LNPIKQD KKG LRFV N FPH GYIWNYGA PQT+E+PN V P+T A+GD+DP+DV EI
Sbjct: 67 LNPIKQDTKKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETKAKGDSDPLDVCEI 126
Query: 190 GE 195
GE
Sbjct: 127 GE 128
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 95.9 bits (228), Expect = 7e-22
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +1
Query: 13 NPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIG 192
+PIKQD+K G LR+V N FP+ G+IWNYGALPQTWE+PN +D T +GD DP+DV EIG
Sbjct: 73 HPIKQDLKNGKLRYVANSFPYHGFIWNYGALPQTWEDPNVIDSRTKMKGDGDPLDVCEIG 132
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 24 AGRKERQPSVREQRLPSSRLHLELR 98
A +K RQPSV +PS HL +
Sbjct: 110 ASKKRRQPSVFNSSVPSLPQHLSTK 134
>SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 535
Score = 23.8 bits (49), Expect = 3.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 73 HRGYIWNYGALPQTW 117
HRGY W++ P TW
Sbjct: 178 HRGYYWSWS--PSTW 190
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 23.0 bits (47), Expect = 5.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 194 SPISMTSTGSLSPLAPVSGS 135
SP+S ++ L+PL P+ G+
Sbjct: 188 SPVSPSNPNFLTPLKPIDGN 207
>SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 505
Score = 23.0 bits (47), Expect = 5.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 102 GTVIPDVAAMREDVVHEPKVAFLYVLLDR 16
G V A E+V PK LY LLD+
Sbjct: 111 GLPASQVPAAEEEVESTPKAKPLYFLLDK 139
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 22.6 bits (46), Expect = 7.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 30 RKERQPSVREQRLPSSRLHLELRCP 104
RK RQPS R+ +P S CP
Sbjct: 402 RKRRQPSNRKTSVPRSPGGKSFVCP 426
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 22.6 bits (46), Expect = 7.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2
Query: 197 RSPISMTSTGSLSPLA 150
R+P+ T +GSL+PL+
Sbjct: 350 RAPLQRTPSGSLTPLS 365
>SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit
Sen2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 22.6 bits (46), Expect = 7.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 43 NLRFVNNVFPHRGYIWNYGALPQTWENPN 129
N+ + FP ++ + G L +ENPN
Sbjct: 182 NVEHLQLTFPEAFFLASLGVLRINYENPN 210
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 22.2 bits (45), Expect = 9.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 124 PNHVDPDTGARGDNDPVDVIE 186
P VDP TG N+PV +E
Sbjct: 526 PIPVDPKTGKALTNNPVPPVE 546
>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 431
Score = 22.2 bits (45), Expect = 9.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 97 GALPQTWENPNHV 135
G L +TW+NP+ V
Sbjct: 89 GTLSKTWKNPSEV 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.141 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,249
Number of Sequences: 5004
Number of extensions: 11701
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 2,362,478
effective HSP length: 45
effective length of database: 2,137,298
effective search space used: 42745960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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