Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13h06
(198 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0875 + 32393496-32393881,32395297-32395397,32395493-323956... 80 2e-16
02_01_0791 - 5930553-5930802,5931042-5932351 29 0.69
11_06_0661 - 26009838-26010950,26011302-26011802 28 0.91
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 28 1.2
07_01_1067 + 9437996-9438093,9438368-9438419,9440437-9440511,944... 27 1.6
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 27 1.6
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 27 1.6
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 27 2.1
02_03_0345 + 17973509-17974131,17974207-17974537,17974624-179749... 27 2.1
04_04_0853 + 28745953-28747635 27 2.8
02_05_0294 + 27609656-27611305 27 2.8
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 27 2.8
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 26 3.7
11_06_0648 + 25873779-25874279,25874418-25875548 26 3.7
10_01_0130 + 1540412-1541173 26 3.7
03_02_0251 - 6821612-6823405,6823738-6823878 26 3.7
08_02_0677 - 19947277-19947342,19948121-19948502,19948573-19948925 26 4.8
03_02_0537 - 9296362-9296538 26 4.8
11_06_0179 + 20952070-20955228 25 6.4
09_06_0028 + 20328599-20328821,20330659-20330735,20330806-203309... 25 6.4
09_06_0008 - 20168429-20170054 25 6.4
04_03_0739 + 19180048-19182039 25 6.4
11_01_0383 + 2898093-2898198,2898593-2898663,2898755-2898880,289... 25 8.5
10_08_0674 + 19788198-19789817 25 8.5
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595 25 8.5
06_03_0428 + 20692616-20692629,20692895-20693717 25 8.5
>02_05_0875 +
32393496-32393881,32395297-32395397,32395493-32395674,
32396135-32396233,32396311-32396403
Length = 286
Score = 80.2 bits (189), Expect = 2e-16
Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 4 EALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDT-GARGDNDPVDV 180
E+ PIKQD KKGNLR+ +P+ WNYG PQTWE+P + D GA GDNDPVDV
Sbjct: 111 ESFTPIKQDTKKGNLRY----YPYN-INWNYGLFPQTWEDPTLANTDVEGAFGDNDPVDV 165
Query: 181 IEIGER 198
+EIGER
Sbjct: 166 VEIGER 171
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 28.7 bits (61), Expect = 0.69
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 88 RCSRDEGRRCSRTEGCLS 35
RCSRD RCSR GC +
Sbjct: 118 RCSRDAFMRCSRLAGCFT 135
>11_06_0661 - 26009838-26010950,26011302-26011802
Length = 537
Score = 28.3 bits (60), Expect = 0.91
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 19 IKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARG 159
I +D+K N+ N P + ++G L TWE P H D G G
Sbjct: 341 IHRDIKPSNILLDGNWVPR---LTDFG-LALTWEGPGHEDTVVGTYG 383
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 115 WENPNHVDPDTGARGDNDPVDVIEI 189
W+ N V PDT G DP D ++I
Sbjct: 282 WQAANFVKPDTKKGGSMDPSDYVKI 306
>07_01_1067 +
9437996-9438093,9438368-9438419,9440437-9440511,
9441455-9441523,9443711-9444232
Length = 271
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 9 PQSYQAGRK-ERQPSVREQRLPSSRLHLELRCPAADLGES*SRRP 140
P + GR ER+P R+ R +HL PA D E +RRP
Sbjct: 113 PIRSRGGRAGERRPRCRQPRRLHGAVHLLSATPAEDAEERPTRRP 157
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -3
Query: 187 FR*RQPGRCRP---SRPCQGRRD*DSPRSAAGHRNS-RCSRDEGRRCSRTE 47
FR + R RP SRP + +D S R S R + +G RCSRTE
Sbjct: 147 FRKQNHPRPRPDKASRPSKENKDKASKVKVKKRRRSDRAADGDGERCSRTE 197
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 28 DVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDND 168
DV KG FVN +W G P+ WE+P P+ D D
Sbjct: 71 DVLKGTCVFVN--------VWALGRDPKYWEDPEEFMPERFENSDMD 109
>06_01_1053 -
8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 85 IWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEI 189
+W+ W+ V PDT G DP D +++
Sbjct: 249 VWSDIISSLAWQAATFVRPDTSKGGSMDPTDYVKV 283
>02_03_0345 +
17973509-17974131,17974207-17974537,17974624-17974985,
17975314-17975572
Length = 524
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 31 VKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIG 192
V +G + VN HR PQ W+ P PD A G N+ VI G
Sbjct: 409 VPQGTMLLVNTFAIHRD--------PQVWDEPEAFIPDRFADGKNEGKMVIPFG 454
>04_04_0853 + 28745953-28747635
Length = 560
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 197 RSPISMTSTGSLSPLAPVSGST*LGFSQVCG 105
RS ISM G L LA GS +GF+ + G
Sbjct: 102 RSMISMLFLGHLGGLALAGGSLAIGFANITG 132
>02_05_0294 + 27609656-27611305
Length = 549
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 197 RSPISMTSTGSLSPLAPVSGST*LGFSQVCG 105
RS ISM G L LA GS +GF+ + G
Sbjct: 103 RSMISMLFLGRLGGLALAGGSLAIGFANITG 133
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 97 GALPQTWENPNHVDPDTGARG-DNDPVDVIEI 189
G P+ W P P GARG + +DV+ +
Sbjct: 83 GEPPEIWRQPGEAPPGGGARGAEVGRIDVVRV 114
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +1
Query: 4 EALNPIKQDVKKGNLRFVNNVFPHRG----YIWNYGALPQTWENPNHVDPDTGA 153
E+L + Q+V+ GN+ + H G Y+ N L +T E H++ A
Sbjct: 433 ESLQALAQEVRDGNVELKETIKHHEGVKALYVDNLMQLERTLERNAHLERSLSA 486
>11_06_0648 + 25873779-25874279,25874418-25875548
Length = 543
Score = 26.2 bits (55), Expect = 3.7
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 19 IKQDVKKGNLRFVNNVFPH-RGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVI 183
I +DVK N+ + PH ++W AL TWE P H + G G P VI
Sbjct: 331 IHRDVKPSNILLDASWAPHLTDFLW---AL--TWEGPGHQENIIGTYGYLAPECVI 381
>10_01_0130 + 1540412-1541173
Length = 253
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 166 RCRPSRPCQGRRD*DSPRSAAGHRNSRCSRDEGRRCSRTEGC 41
R P P RR +P H R +RD G R +GC
Sbjct: 151 RDAPKPPPPPRRQSPAPPPPRQHSQRRATRDYGEEHVRHDGC 192
>03_02_0251 - 6821612-6823405,6823738-6823878
Length = 644
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 197 RSPISMTSTGSLSPLAPVSGST*LGFSQVCG 105
R+ ISM G L LA GS LGF+ + G
Sbjct: 72 RALISMLFLGRLGELALAGGSLALGFANITG 102
>08_02_0677 - 19947277-19947342,19948121-19948502,19948573-19948925
Length = 266
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 49 RFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGAR 156
R V+ V P+RGYI N + WE+ D D AR
Sbjct: 70 RNVSTVGPYRGYIANIPGM--DWESLRVHDADDAAR 103
>03_02_0537 - 9296362-9296538
Length = 58
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 82 SRDEGRRCSRTEGCLSLR 29
+R +GRRCSR GC+ R
Sbjct: 10 TRAKGRRCSRGRGCVMER 27
>11_06_0179 + 20952070-20955228
Length = 1052
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 37 KGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVI 183
KG R V+P++G +W AL + W + D D+ + + V+++
Sbjct: 612 KGKKRNAYEVYPNKGEVW---ALYKDWSMQWNSDADSHRSYEYEVVEIL 657
>09_06_0028 +
20328599-20328821,20330659-20330735,20330806-20330968,
20331095-20331156,20331250-20331328,20331818-20331898,
20332068-20332216,20332254-20332319,20332495-20332643,
20332722-20332761,20333001-20333015
Length = 367
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 22 KQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVD 138
+ D + NLR ++ P R I YG + W + N VD
Sbjct: 207 EHDHESSNLRIQFSLTPRRRPIGWYGCVDNYWLDGNKVD 245
>09_06_0008 - 20168429-20170054
Length = 541
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 197 RSPISMTSTGSLSPLAPVSGST*LGFSQVCG 105
RS +SM G L L GS LGF+ + G
Sbjct: 66 RSLVSMVFLGRLGQLPLAGGSLALGFANITG 96
>04_03_0739 + 19180048-19182039
Length = 663
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 160 RPSRPCQGRRD*DSPR--SAAGHRNSRCSRDEGRRCSRT 50
+P Q RRD D PR +AA R+SR R RCS T
Sbjct: 21 KPGGQVQRRRDRDRPRVDAAACTRDSR--RPTRERCSTT 57
>11_01_0383 +
2898093-2898198,2898593-2898663,2898755-2898880,
2899229-2899378
Length = 150
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 154 SRPCQG-RRD*DSPRSAAGHRNSRCSRDEGRRCSRT 50
S+ C G RR+ +P+ H + +EGRRC T
Sbjct: 90 SKGCNGERRNCKAPQPLEKHVGALFCVEEGRRCGST 125
>10_08_0674 + 19788198-19789817
Length = 539
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 197 RSPISMTSTGSLSPLAPVSGST*LGFSQVCG 105
R ISM G L LA GS +GF+ + G
Sbjct: 73 RPMISMLFLGRLGELALAGGSLAIGFANITG 103
>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
Length = 904
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 96 VIPDVAAMREDVVHEPKVAFLYVLLDRIE 10
++P +++M D VH P V F+ + + +E
Sbjct: 166 ILPLLSSMSRDTVHRPSVLFVLLWMLLVE 194
>06_03_0428 + 20692616-20692629,20692895-20693717
Length = 278
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -3
Query: 163 CRPSRPCQGRRD*DSPRSAAGHRNSRCSRDEGR 65
C P+ P +P S G +RC GR
Sbjct: 24 CSPASPSSSASSTSTPPSPGGEAAARCGEKRGR 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.141 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,215,107
Number of Sequences: 37544
Number of extensions: 94370
Number of successful extensions: 279
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 14,793,348
effective HSP length: 45
effective length of database: 13,103,868
effective search space used: 262077360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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