Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13h06
(198 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 122 3e-29
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 122 3e-29
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 122 3e-29
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 122 3e-29
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 1.8
AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p4... 27 2.4
Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 25 5.6
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 25 5.6
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 25 5.6
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 25 7.4
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 25 7.4
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 25 7.4
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 122 bits (295), Expect = 3e-29
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +1
Query: 4 EALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVI 183
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+DVI
Sbjct: 72 EPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVI 131
Query: 184 EIGER 198
E+G +
Sbjct: 132 EVGSK 136
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 122 bits (295), Expect = 3e-29
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +1
Query: 4 EALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVI 183
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+DVI
Sbjct: 186 EPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVI 245
Query: 184 EIGER 198
E+G +
Sbjct: 246 EVGSK 250
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 122 bits (295), Expect = 3e-29
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +1
Query: 4 EALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVI 183
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+DVI
Sbjct: 187 EPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVI 246
Query: 184 EIGER 198
E+G +
Sbjct: 247 EVGSK 251
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 122 bits (295), Expect = 3e-29
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +1
Query: 4 EALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVI 183
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+DVI
Sbjct: 118 EPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPIDVI 177
Query: 184 EIGER 198
E+G +
Sbjct: 178 EVGSK 182
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 22 KQDVKKGNLRFVNNVFPHRGYIW 90
++D +G LRF+ + PH GY++
Sbjct: 2162 RKDASRGRLRFLKDNEPHDGYMY 2184
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 22 KQDVKKGNLRFVNNVFPHRGYIW 90
++D +G LRF+ + PH GY++
Sbjct: 2162 RKDASRGRLRFLKDNEPHDGYMY 2184
>AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p450
family protein 32B1 protein.
Length = 516
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 43 NLRFVNNVFPHRGYIWNYGALPQTWENP 126
N +VN+V +WNY PQ W P
Sbjct: 211 NDEYVNSVRRLSEIVWNYEKAPQFWLKP 238
>Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical
protein F13B12.1 protein.
Length = 511
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 194 SPISMTSTGSLSPLAPVS 141
SP S S+G+ SPLAP+S
Sbjct: 12 SPTSPASSGASSPLAPIS 29
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 112 TWENPNHVDPDTGARGDNDPVDVIE 186
T ENP +D T + N PV ++E
Sbjct: 298 TTENPKPIDNSTPQKPPNPPVPIVE 322
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 100 ALPQTWENPNHVDPDTGARGDND 168
A P+ WE P H+ PD A+ D
Sbjct: 226 AKPEDWEKPEHI-PDPDAKKPED 247
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 100 ALPQTWENPNHVDPDTGARGDND 168
A P+ WE P H+ PD A+ D
Sbjct: 226 AKPEDWEKPEHI-PDPDAKKPED 247
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 33 KERQPSVREQRLPSSRLHLELRCPAADLGE 122
KER+PS +++ S +LH + P ++ E
Sbjct: 240 KEREPSRKKRNANSQQLHQQQHIPKMEIKE 269
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 33 KERQPSVREQRLPSSRLHLELRCPAADLGE 122
KER+PS +++ S +LH + P ++ E
Sbjct: 271 KEREPSRKKRNANSQQLHQQQHIPKMEIKE 300
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 33 KERQPSVREQRLPSSRLHLELRCPAADLGE 122
KER+PS +++ S +LH + P ++ E
Sbjct: 335 KEREPSRKKRNANSQQLHQQQHIPKMEIKE 364
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 33 KERQPSVREQRLPSSRLHLELRCPAADLGE 122
KER+PS +++ S +LH + P ++ E
Sbjct: 335 KEREPSRKKRNANSQQLHQQQHIPKMEIKE 364
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 3 GGPQSYQAGRKERQPSVREQRLPSSRLHLELR 98
GGP + + GRK++ S E S LH EL+
Sbjct: 90 GGPPA-KRGRKKKAKSESEDEAESDHLHDELK 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.141 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,131,969
Number of Sequences: 27780
Number of extensions: 70670
Number of successful extensions: 205
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 12,740,198
effective HSP length: 45
effective length of database: 11,490,098
effective search space used: 229801960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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