Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13h04
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical pr...    32   0.37 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.37 
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    31   0.64 
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    31   0.64 
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    31   0.64 
Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical p...    30   1.1  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical...    27   7.9  
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ...    27   7.9  
AF016687-3|AAC48090.1|  375|Caenorhabditis elegans Paralysed arr...    27   7.9  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 50  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 139
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical
           protein K02B12.7 protein.
          Length = 423

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +2

Query: 371 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 547
           + + FN +LK  NLP    +EG      + LK T P++ +K+ E S +PV    + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368

Query: 548 V 550
           V
Sbjct: 369 V 369


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -2

Query: 491 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 387
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 428  SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 559
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 449  EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 559
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 428  SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 559
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 449  EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 559
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 428  SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 559
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 449  EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 559
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical
           protein T05G5.12 protein.
          Length = 92

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +2

Query: 377 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSR 556
           S F  Y K+++   D   + ++ Y+K     T P+ QK  + S    A    T ST  S 
Sbjct: 5   SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSS 64

Query: 557 ER 562
           +R
Sbjct: 65  KR 66


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 479 LKQKQPEDSKRPVAEPTETTSTNVSRE 559
           LK+K+P  S +PV++P+ T    V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265


>Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical
           protein T28F4.2 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 543 VEVVSVGSATGLLLSSGCFCFSGKVI 466
           + V+SV   TGL+L  G FC +G  I
Sbjct: 463 LSVISVVEMTGLMLVMGAFCVTGGAI 488


>AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical
           protein Y105E8A.25 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 68  LAAVSAAPQYYHGSSHWPYHHYDPFSPYV 154
           L A+S   ++   S H PY+HY P S  V
Sbjct: 181 LPAISEESEHEQQSIHIPYNHYPPHSSSV 209


>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
           protein Y39G8C.1 protein.
          Length = 1195

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = +2

Query: 95  YYHGSSHWPY---HHYDPFSPYVR 157
           YYHG   W +   HHY PF   VR
Sbjct: 532 YYHGCVSWSWFYPHHYAPFISDVR 555


>AF016687-3|AAC48090.1|  375|Caenorhabditis elegans Paralysed arrest
           at two-fold protein6 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 241 VEVPQHYKRRTRGRRQVSDIYSPAWLRTERHQRESEKWSAD 363
           +EVP+   +   G+RQ   I      R     RE EKWSAD
Sbjct: 145 IEVPE-VSQSEEGQRQKLQIVVQTANRILGQPREQEKWSAD 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,792
Number of Sequences: 27780
Number of extensions: 287413
Number of successful extensions: 917
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)