Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13h03
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical pr...    58   8e-09
AC024877-13|AAF60901.2|  710|Caenorhabditis elegans Nematode ast...    34   0.11 
Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical pr...    31   0.99 
U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z83220-3|CAB05702.1|  493|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical
           protein D2092.2 protein.
          Length = 378

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 25/57 (43%), Positives = 38/57 (66%)
 Frame = +2

Query: 365 FNYDTMKNSLIERLESFTSAPFTVQRICELLTYPRKQYNRVDKFMRAIEKNILVVST 535
           F+ +     ++ + +SF   PFT QR+CELL  P + YN +DKF+RA++K I VV+T
Sbjct: 155 FSTEESMEFVLSKAKSFDGFPFTWQRLCELLIEPMRHYNTIDKFLRAVDKVINVVTT 211


>AC024877-13|AAF60901.2|  710|Caenorhabditis elegans Nematode
           astacin protease protein30 protein.
          Length = 710

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 22/80 (27%), Positives = 36/80 (45%)
 Frame = +2

Query: 194 IPQELNEYLAYVARTGDPVYQWPLVKSLFKEKLLNVITDFYDTTPNTDIPPYPNVDPFNY 373
           IP + ++ L  +     PVY+ P  K+   E+  N+   F       +  P P+ D  N+
Sbjct: 9   IPAKSDKILETIFSDAPPVYRQPRTKAEKIERFRNIARTFSPFVYEVNTTPAPHFD--NF 66

Query: 374 DTMKNSLIERLESFTSAPFT 433
              +N+     E FT APF+
Sbjct: 67  IWQQNAPAVTPEPFTFAPFS 86


>Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical
           protein F22B5.2 protein.
          Length = 256

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 542 PGIVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEAT 670
           P +V   E    DNA H+  G+D         E++ V WK  T
Sbjct: 5   PEVVSWAEAVEQDNAPHIQEGADGTRTETAFTEVDGVRWKVVT 47


>U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical
           protein F41G3.3 protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 308 DFYDTTPNTDIPPYPNVDP 364
           DFYDT P T++PP   + P
Sbjct: 115 DFYDTVPATNVPPVKPMGP 133


>Z83220-3|CAB05702.1|  493|Caenorhabditis elegans Hypothetical
           protein C34B7.3 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 344 PYPNVDPFNYDTMKNSLIERLESFTSAPFT 433
           P+P +   +YD +K ++++  ESF+  P T
Sbjct: 68  PFPTIVICDYDMLKRNIVKNGESFSGRPDT 97


>AF039052-5|AAF98626.2|  586|Caenorhabditis elegans Hypothetical
           protein T22D1.4 protein.
          Length = 586

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 419 SAPFTVQRICELLTYPRKQYNRVDKFMRAIEKN 517
           S     ++  ELL Y +  ++ VD +++A+EK+
Sbjct: 524 SGASAAEKASELLKYDKTVFDAVDNYLKAVEKS 556


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,425,125
Number of Sequences: 27780
Number of extensions: 343271
Number of successful extensions: 1038
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)