Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13g22
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0554 + 4083020-4083854,4083877-4083906,4084843-4084911,408...    29   4.1  
05_03_0182 + 9332280-9332363,9334212-9334286,9334390-9334437,933...    28   5.4  
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269...    27   9.4  
10_02_0197 + 6596197-6596402,6596766-6596828,6599679-6599795,660...    27   9.4  

>02_01_0554 +
           4083020-4083854,4083877-4083906,4084843-4084911,
           4085170-4085445,4085601-4085720,4086037-4086044
          Length = 445

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 480 NEVREGDFRGNNSNG-VNEVREGEIGRNGE 566
           +EV  G+  GN   G V E  EGE+G +GE
Sbjct: 215 DEVEAGEEDGNGDRGEVGEEDEGEVGEDGE 244


>05_03_0182 +
           9332280-9332363,9334212-9334286,9334390-9334437,
           9334513-9334596,9334905-9334966,9335109-9335206,
           9335281-9335390
          Length = 186

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 432 KDEVEVREGVK--GRNGVNEVREGDFRGNNS 518
           K EVE RE +K  G     E+ EGDF G N+
Sbjct: 69  KKEVEKREVLKRQGHGEYREITEGDFLGENA 99


>12_02_0340 -
           17725866-17725884,17726046-17726326,17726842-17726928,
           17727018-17727113,17728484-17728585,17728720-17728762,
           17728834-17728952,17729348-17729444,17730153-17730214,
           17730370-17730432,17730847-17730949,17731402-17731497,
           17731594-17731742,17732356-17732529,17733078-17733156,
           17733807-17733913,17733994-17734062,17734879-17735043,
           17735206-17735703
          Length = 802

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 423 DNRKDEVEVREGV-KGRNGVNEVREGDFRGNNSNGVNEVREGEIGRNGELVEFEK 584
           D+ +DEVE  E   +G    +E  E    G      +EV EGE G++GE  E E+
Sbjct: 104 DDEEDEVEESEDDDEGVEVSDEEVEELEEGKGEEKSDEVEEGEEGQDGEEEEKEE 158


>10_02_0197 +
           6596197-6596402,6596766-6596828,6599679-6599795,
           6600311-6600545,6600771-6600929,6601159-6601310,
           6602511-6602571
          Length = 330

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 236 SKL**ILPYKFWSGPITCWTVKFE 165
           SK+  + PYK+WS  ITC    F+
Sbjct: 208 SKVLKVYPYKYWSSMITCLVGGFQ 231


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,164,488
Number of Sequences: 37544
Number of extensions: 221570
Number of successful extensions: 521
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)