Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13g20
         (362 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73359-1|CAA97728.1|  334|Homo sapiens 92M18.1 (breast cancer 2,...    29   3.4  
X95152-1|CAA64484.1| 3418|Homo sapiens brca2 protein.                  29   3.4  
U43746-1|AAB07223.1| 3418|Homo sapiens BRCA2 protein.                  29   3.4  
AY436640-1|AAQ97181.1| 3418|Homo sapiens breast cancer 2, early ...    29   3.4  
AL445212-4|CAI40479.1| 3418|Homo sapiens breast cancer 2, early ...    29   3.4  
AL137247-6|CAI13195.1| 3418|Homo sapiens breast cancer 2, early ...    29   3.4  

>Z73359-1|CAA97728.1|  334|Homo sapiens 92M18.1 (breast cancer 2,
           early onset (breast cancer type 2 susceptibility prot
           protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 69  LIAIQSYASRFLMIVKSNQLI*ESKLAYRYIFRNGILLLKSDDESIIKQIPEQNQFK 239
           L+AI+ +      I+K + LI  S L +R   ++G+L L + D S+    P++  F+
Sbjct: 14  LLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQ 70


>X95152-1|CAA64484.1| 3418|Homo sapiens brca2 protein.
          Length = 3418

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 69   LIAIQSYASRFLMIVKSNQLI*ESKLAYRYIFRNGILLLKSDDESIIKQIPEQNQFK 239
            L+AI+ +      I+K + LI  S L +R   ++G+L L + D S+    P++  F+
Sbjct: 3100 LLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQ 3156


>U43746-1|AAB07223.1| 3418|Homo sapiens BRCA2 protein.
          Length = 3418

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 69   LIAIQSYASRFLMIVKSNQLI*ESKLAYRYIFRNGILLLKSDDESIIKQIPEQNQFK 239
            L+AI+ +      I+K + LI  S L +R   ++G+L L + D S+    P++  F+
Sbjct: 3100 LLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQ 3156


>AY436640-1|AAQ97181.1| 3418|Homo sapiens breast cancer 2, early onset
            protein.
          Length = 3418

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 69   LIAIQSYASRFLMIVKSNQLI*ESKLAYRYIFRNGILLLKSDDESIIKQIPEQNQFK 239
            L+AI+ +      I+K + LI  S L +R   ++G+L L + D S+    P++  F+
Sbjct: 3100 LLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQ 3156


>AL445212-4|CAI40479.1| 3418|Homo sapiens breast cancer 2, early onset
            protein.
          Length = 3418

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 69   LIAIQSYASRFLMIVKSNQLI*ESKLAYRYIFRNGILLLKSDDESIIKQIPEQNQFK 239
            L+AI+ +      I+K + LI  S L +R   ++G+L L + D S+    P++  F+
Sbjct: 3100 LLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQ 3156


>AL137247-6|CAI13195.1| 3418|Homo sapiens breast cancer 2, early onset
            protein.
          Length = 3418

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 69   LIAIQSYASRFLMIVKSNQLI*ESKLAYRYIFRNGILLLKSDDESIIKQIPEQNQFK 239
            L+AI+ +      I+K + LI  S L +R   ++G+L L + D S+    P++  F+
Sbjct: 3100 LLAIKFWIDLNEDIIKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQ 3156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,214,039
Number of Sequences: 237096
Number of extensions: 629732
Number of successful extensions: 727
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)