Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13g16
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 38 0.006
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 37 0.014
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 37 0.018
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 36 0.024
04_04_0683 - 27234137-27234486,27234645-27234756,27234889-272349... 31 1.2
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 30 1.6
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 29 3.6
04_04_1323 + 32644956-32645096,32645488-32646126,32646701-326469... 29 3.6
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106... 29 3.6
12_01_0803 + 7371349-7372146,7372301-7372675 28 6.3
12_02_0469 - 19424703-19424906,19425073-19425142,19425409-194263... 28 8.3
>04_04_1445 -
33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 619 ENFSDLPIWNFDGSSTNQADGHNSDTYL 702
E+ S+LP WN+DGSST QA G +S+ L
Sbjct: 844 EDPSELPKWNYDGSSTGQAPGEDSEVIL 871
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 271 VLTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLN 420
V T + V L + P DKI+A YIW+ G+G LR K RT++
Sbjct: 792 VSTETTGVVTRMEQLLNMDTTPF-TDKIIAEYIWVGGTGIDLRSKSRTIS 840
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 628 SDLPIWNFDGSSTNQADGHNSDTYL 702
S LP WNFDGSST QA G +S+ L
Sbjct: 75 SKLPKWNFDGSSTGQATGDDSEVIL 99
>03_02_0210 -
6425708-6425863,6425955-6426114,6426204-6426295,
6426490-6426564,6426701-6426829,6427312-6427375,
6427761-6427867,6428795-6428843,6428955-6429058,
6429166-6429205,6429492-6429565
Length = 349
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 628 SDLPIWNFDGSSTNQADGHNSDTYL 702
S LP WN+DGSST QA G +S+ L
Sbjct: 48 SQLPKWNYDGSSTGQAPGEDSEVIL 72
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 343 ADKILATYIWIDGSGEHLRCKDRTL 417
+DKI+A YIW+ GSG LR K RT+
Sbjct: 16 SDKIIAEYIWVGGSGIDLRSKARTV 40
>02_05_0661 -
30693701-30693853,30694037-30694196,30694290-30694381,
30694469-30694543,30694671-30694799,30694916-30695003,
30695118-30695224,30695645-30695693,30695802-30695905,
30696108-30696147,30696838-30696911
Length = 356
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 346 DKILATYIWIDGSGEHLRCKDRTLN 420
+KI+A YIWI GSG LR K RTL+
Sbjct: 17 EKIIAEYIWIGGSGMDLRSKARTLS 41
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 628 SDLPIWNFDGSSTNQADGHNSDTYL 702
S LP WN+DGSST QA G +S+ L
Sbjct: 48 SKLPKWNYDGSSTGQAPGEDSEVIL 72
>04_04_0683 -
27234137-27234486,27234645-27234756,27234889-27234961,
27235071-27235491,27236148-27236403
Length = 403
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 349 KILATYIWIDGSGEHLRCKDRTLNFIPKAPKDKLSRILEDYNARAKSN 492
K A+++ G+G+ L C DR LN P DKLS ++ A S+
Sbjct: 309 KCQASFMPKPGNGKDLACSDRALNLF-MLPPDKLSMLVPPQYANTDSD 355
>01_03_0303 + 14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 225 WVYHFCCLHIKYIVIGCRLLA 163
W Y F LH K++VIGC L+
Sbjct: 1241 WPYRFSNLHNKFVVIGCNTLS 1261
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 172 PTTNNNIFDMQTTEMVDPVIDHRPYNPKILSGPVLTNSP 288
P T N + DMQ + D V D P +S V T+SP
Sbjct: 2325 PYTGNRVLDMQPDQTGDDVDDDLPSQDDDISEHVTTDSP 2363
>04_04_1323 +
32644956-32645096,32645488-32646126,32646701-32646907,
32647020-32647100,32647686-32648566,32648641-32648932,
32649657-32650673,32651334-32651605,32651992-32652493
Length = 1343
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +1
Query: 442 DKLSRILEDYNARAKSNAREWKLKNEVHFLIHYYPKDQEGPSGYESNCSPKNERKNSFDE 621
D+ S L+ +AR ++ K+K EVHF ++ K + +G + +N ++
Sbjct: 231 DEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEKSDKAKTGNDKFGYKRNIINETYYI 290
Query: 622 NFSDLPI 642
N LP+
Sbjct: 291 NIGRLPV 297
>01_05_0006 +
17008799-17009417,17010035-17010162,17010425-17010650,
17010792-17010925,17010988-17011161,17011234-17012238
Length = 761
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 359 ARILSAGSGRSLYRLSSVLDSTAFGELVKTGPDR 258
AR L +LY SS+LD + GEL++ PDR
Sbjct: 553 ARDLDPSQTSTLYCQSSLLDKSENGELIEMYPDR 586
>12_01_0803 + 7371349-7372146,7372301-7372675
Length = 390
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 391 HLRCKDRTLNFIPKAPKDKLSRILEDYNAR--AKSNAREWKLKNEVHFL 531
H+ KD +F P+A + + +I NAR + + WK+ N + F+
Sbjct: 185 HINGKDEKFDFRPRAEQCSMVKIKYSPNARNIKEVEVQPWKMNNLIAFM 233
>12_02_0469 -
19424703-19424906,19425073-19425142,19425409-19426302,
19426975-19427124,19427382-19427572,19427713-19427835
Length = 543
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +1
Query: 442 DKLSRILEDYNARAKSNAREWKLKNEVHFLIHYYPKDQEGPSGYESNCSPKNERKNSFDE 621
DK+ + +D + SN R L + +H + YY + YE S E++ FD
Sbjct: 140 DKVGFVKKDLYNYSSSNQRSESLNSCLHRHLDYYMSLLDLVEHYEVCVSELREKEAEFDS 199
Query: 622 NFS-DLPIWNFDGSSTNQADGH 684
S P D ++ GH
Sbjct: 200 KASQSWPATITDSPEIEESAGH 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,246,530
Number of Sequences: 37544
Number of extensions: 375682
Number of successful extensions: 916
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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