Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13g02
         (672 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632...    28   7.8  
01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518     28   7.8  

>06_03_0640 -
           23059473-23060489,23060592-23060651,23063163-23063283,
           23063476-23065496
          Length = 1072

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = -2

Query: 632 HVPFEISRVVKGECVIHALLQGH-VVWSGILVCTRPDIVENRV-QVKSDHTDENGKREYV 459
           HVP E   +    C +  LLQGH + WS  +V     I ++   +V+    DE      +
Sbjct: 237 HVPLENKVLDNNSCTLDELLQGHGLCWSSDVVGASETISQSDPDRVRKSDIDEGVDVSLI 296

Query: 458 GH 453
            H
Sbjct: 297 EH 298


>01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518
          Length = 429

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 635 QHVPFEISRVVKGEC-VIHALLQGHVVWS 552
           +HV F++ +V  G   V H L Q HVVW+
Sbjct: 398 KHVAFQVLKVKPGTVPVCHFLPQDHVVWT 426


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,786,025
Number of Sequences: 37544
Number of extensions: 306255
Number of successful extensions: 530
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)