Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13f23
(380 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 47 9e-07
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 36 0.002
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 35 0.005
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 34 0.007
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 32 0.026
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 31 0.046
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 30 0.11
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 27 0.99
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 27 1.3
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 47.2 bits (107), Expect = 9e-07
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -3
Query: 312 RVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYE 163
+VFD+D NGYIT +EL L +GE ++ ++ ++ D D DG I+YE
Sbjct: 92 KVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYE 141
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 36.3 bits (80), Expect = 0.002
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = -3
Query: 312 RVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDY 166
RVFD+D++GYI + ++ +GE ++D ++ ++ D + G DY
Sbjct: 85 RVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDY 133
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 34.7 bits (76), Expect = 0.005
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -3
Query: 309 VFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEGLFFI 148
VFD D NGYI E AL + + +L L D+D++G I Y+ + I
Sbjct: 71 VFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRI 124
Score = 25.0 bits (52), Expect = 4.0
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 12/62 (19%)
Frame = -3
Query: 312 RVFDRDDNGYITRDEL----QAALEMIG--------EPVTDAQLNQVLALGDIDHDGRID 169
+++D D+NG I+ DE+ A +M+G E + ++N++ + D + DG++
Sbjct: 106 QLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLT 165
Query: 168 YE 163
E
Sbjct: 166 LE 167
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 34.3 bits (75), Expect = 0.007
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = -3
Query: 312 RVFDRDDNGYITRDELQAALE-MIGEPVTDAQLNQV----LALGDIDHDGRIDYE 163
+++D D +GYI+ EL L+ M+G + + QL Q+ + D D DG+I +E
Sbjct: 100 KIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFE 154
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 32.3 bits (70), Expect = 0.026
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -3
Query: 309 VFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRID 169
+FD D+ G I+ L+ + + E + D +L ++ D+D DG I+
Sbjct: 118 LFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEIN 164
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 31.5 bits (68), Expect = 0.046
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = -3
Query: 312 RVFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDY 166
+VFD+D G I EL+ L +GE +++ +++++L G DG ++Y
Sbjct: 84 QVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK-GVPVKDGMVNY 131
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 30.3 bits (65), Expect = 0.11
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 303 DRDDNGYITRDELQAALEMIGEPVTDAQLNQVLALGD 193
D D GYI +DE A+E+I ++ L +LA D
Sbjct: 346 DTQDRGYIDKDEFAVAMEIIKLRLSGKSLASILAYDD 382
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 27.1 bits (57), Expect = 0.99
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 309 VFDRDDNGYITRDELQAALEMIGEPVTDAQLNQVLAL 199
+FD GYI ++L+ + +GE +T QL +L L
Sbjct: 20 LFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL 56
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 26.6 bits (56), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 175 DRL*RFVLHLLISNHRESIYIL 110
D + RFVLHLL+SN E I ++
Sbjct: 756 DNIMRFVLHLLVSNVGEVILLV 777
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,411,846
Number of Sequences: 5004
Number of extensions: 25340
Number of successful extensions: 68
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 124270298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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