Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13f15
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39472-8|AAP86618.1|  338|Caenorhabditis elegans Serpentine rece...    30   1.4  
U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AC006743-1|AAF60503.1|  255|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z75533-3|CAA99822.1|  868|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>U39472-8|AAP86618.1|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 32 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/68 (25%), Positives = 34/68 (50%)
 Frame = -1

Query: 547 FSDSNLIYGMYSSKSISLSFSMNTCIHTVFAVFGLLVLYKSVSKI*FVTGFNCASGINVK 368
           +SD N+   M++S+   +   +N+C+  +F    L +    +  I F   F+C  G+  +
Sbjct: 95  YSD-NMTAIMFTSEECFVQHVLNSCVRFLFIAIELALNVDRIIVILFRKHFHCYPGVRGE 153

Query: 367 IKKLLYII 344
           I  +L +I
Sbjct: 154 ILNILAVI 161


>U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical
           protein ZC395.8 protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 126 SEYREHNPLLHDELSEEDQSIPRHYRRRSFSNRNR 230
           S  R  N    +  S  D S PR+Y  RSF  RN+
Sbjct: 594 SRERSSNRNYDERWSRNDYSNPRNYSNRSFHQRNQ 628


>AC006743-1|AAF60503.1|  255|Caenorhabditis elegans Hypothetical
           protein Y38C1BA.1 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 527 IRYVFVEIDFFIFLY--EYVHPYCFCSVWLISFIQVCIENLIRH 402
           IR +F+ I  F+  Y  +Y   +  C++W + FI  CI  +  H
Sbjct: 27  IRDMFMNIRRFVRWYTLDYDMGHALCNIWWLWFIYQCIHIIFIH 70


>Z75533-3|CAA99822.1|  868|Caenorhabditis elegans Hypothetical
           protein C54G4.4 protein.
          Length = 868

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 353 VYYKCSNGYHSKSNPPIRYKS 291
           V Y+CSNG+H  ++P   Y+S
Sbjct: 563 VEYECSNGWHLANSPSPSYRS 583


>Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical
           protein C27C12.7 protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +3

Query: 558 YIYRLIVVLNDTKLSNYHIIGEENNEIAMSTLWTEKVYSNEKNY 689
           Y+Y ++ + N T  +    +G E N +  +  W     SN+  Y
Sbjct: 174 YLYHIVKINNKTVSTEQWHVGPEENSLIQAFYWNPNASSNDFVY 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,293
Number of Sequences: 27780
Number of extensions: 339069
Number of successful extensions: 1100
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)