Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13f15
(706 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 25 0.70
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.70
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 24 1.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 1.6
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 3.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 3.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 4.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 4.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.5
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.5
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 16 KCLYSLVNLFIFNNHQADHQQL*IYSFLN 102
KC YS VN + N+H H + Y N
Sbjct: 21 KCSYSCVNKSMLNSHLKSHSNVYQYRCAN 49
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 25.0 bits (52), Expect = 0.70
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Frame = +3
Query: 570 LIVVLNDTKLSNYHIIGEE---NNEIAMS 647
LI+ +DTKLS+ I+GE+ N+E++ S
Sbjct: 366 LILTESDTKLSSQGILGEDVENNSEVSKS 394
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 403 TGFNCASGINVKIKKLLYIINVVMVIIPSPIH 308
+ +N + N K+ YIIN+ + +P PI+
Sbjct: 92 SNYNNYNNYNKKLYYKNYIINIEQIPVPVPIY 123
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 364 KKLLY-IINVVMVIIPSPIHQYATN 293
KKL Y IIN+ + +P P+ Y N
Sbjct: 110 KKLYYNIINIEQIPVPVPVPVYCGN 134
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 364 KKLLY-IINVVMVIIPSPIHQYATN 293
KKL Y IIN+ + +P P+ Y N
Sbjct: 110 KKLYYNIINIEQIPVPVPVPVYCGN 134
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 394 NCASGINVKIKKLL--YIINVVMVIIPSPIH 308
N + N KKL YIIN+ + +P P++
Sbjct: 104 NYNNNYNNNYKKLYKNYIINIEQIPVPVPVY 134
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 394 NCASGINVKIKKLL--YIINVVMVIIPSPIH 308
N + N KKL YIIN+ + +P P++
Sbjct: 104 NYNNNYNNNYKKLYKNYIINIEQIPVPVPVY 134
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 394 NCASGINVKIKKLLYIINVVMVIIPSPIH 308
N + N K+ YIIN+ + +P PI+
Sbjct: 336 NNYNNYNKKLYYKNYIINIEQIPVPVPIY 364
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 320 WNDNHYYIYNIQ*LFYFNIN 379
+N+N+Y N + L Y+NIN
Sbjct: 97 YNNNNYNNNNYKKLQYYNIN 116
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 320 WNDNHYYIYNIQ*LFYFNIN 379
+N+N+Y N + L Y+NIN
Sbjct: 97 YNNNNYNNNNYKKLQYYNIN 116
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 320 WNDNHYYIYNIQ*LFYFNIN 379
+N+N+Y N + L Y+NIN
Sbjct: 97 YNNNNYNNNNYKKLQYYNIN 116
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 320 WNDNHYYIYNIQ*LFYFNIN 379
+N+N+Y N + L Y+NIN
Sbjct: 97 YNNNNYNNNNYKKLQYYNIN 116
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 306 WWIGLGMITITTFIIYNSFFILTLMPEAQLKPVTN 410
WW + +I + N IL ++ E L+ VTN
Sbjct: 188 WWALILVIVPCLTLFGNVLVILAVVRERALQTVTN 222
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 497 FIFLYEYVHPYCFCSVWLISFIQVCIENLIRHW 399
++ +E V+ SV++ F +C+ LI HW
Sbjct: 228 YVSQWEEVYFLNMASVFMRIFNLICMMLLIGHW 260
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 376 NVKIKKLLYIINVVMVIIPSPIH 308
N K+ YIIN+ + +P P++
Sbjct: 112 NKKLYYKNYIINIEQIPVPVPVY 134
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 132 YREHNPLLHDELSEEDQSIPRHYRRRSFSNRN 227
+ E LL + S + S R +RS+ N N
Sbjct: 256 HNEKEKLLEERTSRKRYSRSREREQRSYKNEN 287
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 376 NVKIKKLLYIINVVMVIIPSPIH 308
N K+ YIIN+ + +P P++
Sbjct: 337 NKKLYYKNYIINIEQIPVPVPVY 359
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,231
Number of Sequences: 438
Number of extensions: 4637
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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